RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ARL6IP4Q66PJ3 421 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 CD300LGQ6UXG3 332 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 SYT2Q8N9I0 419 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 NETO1Q8TDF5 533 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 RABGGTAQ92696 567 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 KCNN1Q92952 543 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 PPP1R10Q96QC0 940 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 RPP25Q9BUL9 199 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 TIPINQ9BVW5 301 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 PLEKHA4Q9H4M7 779 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 DPP7Q9UHL4 492 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 CNOT1A5YKK6 2376 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 CASTOR2A6NHX0 329 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 TMEM189-UBE2V1I3L0A0 370 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 TGM5O43548 720 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 KIF4AO95239 1232 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 GLUD1P00367 558 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 SPATA31D3P0C874 917 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 CD72P21854 359 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 IGFBP6P24592 240 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 PEX3P56589 373 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 MLF2Q15773 248 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 RTP2Q5QGT7 225 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 MCTP1Q6DN14 999 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 SPATA31D4Q6ZUB0 917 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 PIK3R5Q8WYR1 880 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 CLSTN3Q9BQT9 956 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 NT5C3AQ9H0P0 336 aa11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 RBM19Q9Y4C8 960 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-203ENST00000534830 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.643e-9■■■■■ 206.8
CLSTN3-203ENST00000534830 CCDC169A6NNP5 214 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 SLC26A4O43511 780 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 LIG1P18858 919 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 GRM5P41594 1212 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 MAGEA9P43362 315 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 CREMQ03060 361 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 PRKCQQ04759 706 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 CUL4AQ13619 759 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 UPP1Q16831 310 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 TMEM119Q4V9L6 283 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 SLC44A4Q53GD3 710 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 ZBTB41Q5SVQ8 909 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 PRSS55Q6UWB4 352 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 CEP120Q8N960 986 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 SPIRE2Q8WWL2 714 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 FGF14Q92915 247 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 CDT1Q9H211 546 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 ZDHHC7Q9NXF8 308 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 GDAQ9Y2T3 454 aa11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 FASNP49327 2511 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-203ENST00000534830 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 VWA3AA6NCI4 1184 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 SFI1A8K8P3 1242 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 H3BQV1 296 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 SLC16A4O15374 487 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 PLS3P13797 630 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 RPL17P18621 184 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 FGFR3P22607 806 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 CLCNKBP51801 687 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 FAM171A1Q5VUB5 890 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 PARM1Q6UWI2 310 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 PALB2Q86YC2 1186 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 HASPINQ8TF76 798 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 NELL1Q92832 810 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 MRPL4Q9BYD3 311 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 OSBPL6Q9BZF3 934 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 PRKD2Q9BZL6 878 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 UPF2Q9HAU5 1272 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 LTB4R2Q9NPC1 389 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 KMT5AQ9NQR1 393 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 FBXW11Q9UKB1 542 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-203ENST00000534830 NCAM2O15394 837 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 ADAM12O43184 909 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 ZMYND10O75800 440 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms