RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZBED4O75132 1171 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 BAIAP3O94812 1187 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 ZNF205O95201 554 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CXCL10P02778 98 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 VAV1P15498 845 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 DNAJB1P25685 340 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 RFC2P35250 354 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 EIF4A3P38919 411 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CCNFP41002 786 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 RBM25P49756 843 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 KRTAP10-2P60368 255 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 KLRC3Q07444 240 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 SIGLEC14Q08ET2 396 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 EFEMP1Q12805 493 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 G3BP1Q13283 466 aaKnown RBP eCLIP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 ADAM15Q13444 863 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CBX2Q14781 532 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 PTGISQ16647 500 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 PTPROQ16827 1216 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 DUSP28Q4G0W2 176 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 TNNI3KQ59H18 835 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 MUM1L1Q5H9M0 696 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 ZNF618Q5T7W0 954 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CDCP2Q5VXM1 449 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 FBXL19Q6PCT2 694 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CRTC3Q6UUV7 619 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 ADGRG2Q8IZP9 1017 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 MYOCDQ8IZQ8 938 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 LCORLQ8N3X6 602 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 DBF4BQ8NFT6 615 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 KCNG4Q8TDN1 519 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 NKD2Q969F2 451 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 RIPOR3Q96MK2 946 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 PRRX2Q99811 253 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 SPATA25Q9BR10 227 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 MTG1Q9BT17 334 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 APOL5Q9BWW9 433 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 WDR11Q9BZH6 1224 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CNNM2Q9H8M5 875 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 ARMT1Q9H993 441 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 A1CFQ9NQ94 594 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 KBTBD4Q9NVX7 518 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CLIP2Q9UDT6 1046 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CD207Q9UJ71 328 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 CDH22Q9UJ99 828 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 BARX2Q9UMQ3 279 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 TNNQ9UQP3 1299 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 FAM50BQ9Y247 325 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 FPGT-TNNI3KV9GXZ4 949 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 USP24Q9UPU5 2620 aa3.55□□□□□ -1.84
CHMP4A-208ENST00000534106 MYH13Q9UKX3 1938 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 SIPA1L1O43166 1804 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ASPMQ8IZT6 3477 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 A0A0G2JMZ2 1700 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 A0A1B0GTL3 188 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ABHD14A-ACY1A0A1B0GW23 586 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 TMEM232C9JQI7 657 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 BCAR3O75815 825 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ATE1O95260 518 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ARIH2O95376 493 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 NDUFB10O96000 172 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 GSNP06396 782 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 LINC00271P0C7V0 271 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 CKBP12277 381 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 GARTP22102 1010 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 NOP2P46087 812 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 HTRA4P83105 476 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 MVKQ03426 396 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 SMAD4Q13485 552 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 BFSP2Q13515 415 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 AUHQ13825 339 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ST3GAL2Q16842 350 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 TRIM71Q2Q1W2 868 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 SEZ6Q53EL9 994 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 CCDC158Q5M9N0 1113 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 PAQR3Q6TCH7 311 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 NSMFQ6X4W1 530 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 DNAJC14Q6Y2X3 702 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 LRRC8DQ7L1W4 858 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 RASGRP2Q7LDG7 609 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 CHST3Q7LGC8 479 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 PRPF38AQ8NAV1 312 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 TET1Q8NFU7 2136 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 OR6J1Q8NGC5 347 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 DDX1Q92499 740 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 KAT2BQ92831 832 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 EAF2Q96CJ1 260 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 MSLNLQ96KJ4 702 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 SLC6A18Q96N87 628 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 ALG1Q9BT22 464 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 KANSL2Q9H9L4 492 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 SLC38A10Q9HBR0 1119 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 RNF146Q9NTX7 359 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 HDAC6Q9UBN7 1215 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 CTNNA3Q9UI47 895 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 DBNLQ9UJU6 430 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 MYRFQ9Y2G1 1151 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 USP15Q9Y4E8 981 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 INSL6Q9Y581 213 aa3.54□□□□□ -1.84
CHMP4A-208ENST00000534106 CTDP1Q9Y5B0 961 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms