RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 FNIP2Q9P278 1114 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 STK24Q9Y6E0 443 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 CFAP54Q96N23 3096 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 TCHHQ07283 1943 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 SF3B1O75533 1304 aaKnown RBP eCLIP10.52□□□□□ -0.734e-6■■■■■ 92.4
SSBP3-215ENST00000533946 ZMYM2Q9UBW7 1377 aa10.52□□□□□ -0.73
SSBP3-215ENST00000533946 WDR27A2RRH5 827 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 GOLGA8IPA6NC78 632 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 GOLGA8JA6NMD2 632 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 PRPF6O94906 941 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 PIGRP01833 764 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 ZSCAN22P10073 491 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 PDCP20941 246 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 MTHFRP42898 656 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.733e-6■■■□□ 14.6
SSBP3-215ENST00000533946 DNM1Q05193 864 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 STRN3Q13033 797 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 CCDC142Q17RM4 750 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 SLC5A9Q2M3M2 681 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 JADE1Q6IE81 842 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 ZPBP2Q6X784 338 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 ZNF720Q7Z2F6 126 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 GPIHBP1Q8IV16 184 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 EFCAB13Q8IY85 973 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 TTC9BQ8N6N2 239 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 PRSS33Q8NF86 280 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 RSPH1Q8WYR4 309 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 SAAL1Q96ER3 474 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 POP1Q99575 1024 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 MSTO1Q9BUK6 570 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 TIPINQ9BVW5 301 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 C17orf75Q9HAS0 396 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 CPSF3Q9UKF6 684 aaKnown RBP10.51□□□□□ -0.73
SSBP3-215ENST00000533946 ODF2LQ9ULJ1 636 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 TSC2P49815 1807 aa10.51□□□□□ -0.73
SSBP3-215ENST00000533946 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 HNRNPDLO14979 420 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 SPTLC2O15270 562 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 HCRTO43612 131 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PI15O43692 258 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 NR1I2O75469 434 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 ZMYND10O75800 440 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 SOAT2O75908 522 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 F13A1P00488 732 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 C8AP07357 584 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 LIG4P49917 911 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 SMTNP53814 917 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 ROR1Q01973 937 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 RAB33AQ14088 237 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 MRPL58Q14197 206 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 STK38Q15208 465 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PPFIBP1Q86W92 1011 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 MAP4K3Q8IVH8 894 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 HS6ST3Q8IZP7 471 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 SLC7A14Q8TBB6 771 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 ING5Q8WYH8 240 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PBXIP1Q96AQ6 731 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 DHX58Q96C10 678 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 TCEAL4Q96EI5 215 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 RIPOR3Q96MK2 946 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 CBWD1Q9BRT8 395 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 BLZF1Q9H2G9 400 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PCIF1Q9H4Z3 704 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 KCNK12Q9HB15 430 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 WDR6Q9NNW5 1121 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 LARSQ9P2J5 1176 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 DNMT3BQ9UBC3 853 aaKnown RBP10.5□□□□□ -0.73
SSBP3-215ENST00000533946 FBXL5Q9UKA1 691 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PCDHA7Q9UN72 937 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 CLUHO75153 1309 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 PTPRJQ12913 1337 aa10.5□□□□□ -0.73
SSBP3-215ENST00000533946 FRMD3A2A2Y4 597 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 OGTO15294 1046 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 TBCAO75347 108 aaKnown RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 PAPLNO95428 1278 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 BMP15O95972 392 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 ADRB2P07550 413 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 CLTAP09496 248 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 IDEP14735 1019 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 GJA1P17302 382 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 CCR2P41597 374 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 STAT6P42226 847 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 BMS1Q14692 1282 aaKnown RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 LMBRD2Q68DH5 695 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 RNF19BQ6ZMZ0 732 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms