RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 HACE1Q8IYU2 909 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 ELMOD1Q8N336 334 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-215ENST00000533818 ZNF512Q96ME7 567 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-215ENST00000533818 LZTS2Q9BRK4 669 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 FSCN3Q9NQT6 498 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
CSDE1-215ENST00000533818 PLXNB3Q9ULL4 1909 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 IGLV3-22A0A075B6J6 115 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 DPYSL4O14531 572 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 TNFRSF10BO14763 440 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 EGFP01133 1207 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 SRGAP2CP0DJJ0 459 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 AKAP5P24588 427 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 DMC1Q14565 340 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 PTPAQ15257 358 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
CSDE1-215ENST00000533818 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 LPCAT2Q7L5N7 544 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 HEATR3Q7Z4Q2 680 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 SLCO6A1Q86UG4 719 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 CMTR1Q8N1G2 835 aaKnown RBP11.77□□□□□ -0.53
CSDE1-215ENST00000533818 SRBD1Q8N5C6 995 aaKnown RBP11.77□□□□□ -0.53
CSDE1-215ENST00000533818 ZNF461Q8TAF7 563 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 LRRC3BQ96PB8 259 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 SH2D3AQ9BRG2 576 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 NIFKQ9BYG3 293 aaKnown RBP11.77□□□□□ -0.53
CSDE1-215ENST00000533818 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 CYP4F11Q9HBI6 524 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 KLK14Q9P0G3 267 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 SLC6A14Q9UN76 642 aa11.77□□□□□ -0.53
CSDE1-215ENST00000533818 MYH9P35579 1960 aaKnown RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TEX51A0A1B0GUA7 166 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TRDMT1O14717 391 aaKnown RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 ERLIN2O94905 339 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 FGFR3P22607 806 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TRDNQ13061 729 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TUSC3Q13454 348 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 PCSK4Q6UW60 755 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 LRRC69Q6ZNQ3 347 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TMPRSS7Q7RTY8 843 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 MARCH9Q86YJ5 346 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 ARID3BQ8IVW6 561 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TCEAL8Q8IYN2 117 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 MINDY1Q8N5J2 469 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 LEMD2Q8NC56 503 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TSTD1Q8NFU3 115 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 OR2I1PQ8NGU4 316 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 RPLP0P6Q8NHW5 317 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 CEP89Q96ST8 783 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 MAP3K14Q99558 947 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 ARID3AQ99856 593 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 TRIM6Q9C030 488 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 CSRNP2Q9H175 543 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 ASAH2Q9NR71 780 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 BACE2Q9Y5Z0 518 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
CSDE1-215ENST00000533818 PDCD11Q14690 1871 aaKnown RBP11.76□□□□□ -0.53
CSDE1-215ENST00000533818 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 B8ZZF3 427 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 ABLIM3O94929 683 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 DPP6P42658 865 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 PTGER3P43115 390 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 GNAQP50148 359 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
CSDE1-215ENST00000533818 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
CSDE1-215ENST00000533818 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
CSDE1-215ENST00000533818 TAF1BQ53T94 588 aaPredicted RBP11.75□□□□□ -0.53
CSDE1-215ENST00000533818 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 GPR155Q7Z3F1 870 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 DAGLBQ8NCG7 672 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 SHKBP1Q8TBC3 707 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 CPB2Q96IY4 423 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 KIF2CQ99661 725 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 RIC8AQ9NPQ8 531 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 INSL5Q9Y5Q6 135 aa11.75□□□□□ -0.53
CSDE1-215ENST00000533818 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 SEC24AO95486 1093 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 ATF2P15336 505 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 AXLP30530 894 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 CSRP3P50461 194 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 EPHA5P54756 1037 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 ARPP19P56211 112 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 ROR1Q01973 937 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 SLC14A1Q13336 389 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 DUOXA1Q1HG43 343 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms