RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SPARCL1Q14515 664 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 METTL23Q86XA0 190 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 FAM84AQ96KN4 292 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 RBM15Q96T37 977 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAD50-209ENST00000533482 OSBPL8Q9BZF1 889 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.35e-15■■■■■ 36.8
RAD50-209ENST00000533482 MYBL2P10244 700 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 TGFB2P61812 414 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 NPY5RQ15761 445 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 P3H1Q32P28 736 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 RAPH1Q70E73 1250 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 KAT5Q92993 513 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 CARD9Q9H257 536 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 ACTR5Q9H9F9 607 aaPredicted RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 ATRNO75882 1429 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 CELF2O95319 508 aaKnown RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 FGRP09769 529 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 RALAP11233 206 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 PRLRP16471 622 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 SDC4P31431 198 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 SLC8A1P32418 973 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 NME3Q13232 169 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 PGM5Q15124 567 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 AMHR2Q16671 573 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 Q4G0T1 1027 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 CALR3Q96L12 384 aaKnown RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
RAD50-209ENST00000533482 ANKEF1Q9NU02 776 aa13.15□□□□□ -0.3
RAD50-209ENST00000533482 EIF4E1BA6NMX2 242 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 CRCPO75575 148 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 CBWD3Q5JTY5 395 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 CBWD5Q5RIA9 395 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 PDZD4Q76G19 769 aaPredicted RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 MAFGO15525 162 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 PEX10O60683 326 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 MAP3K6O95382 1288 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 LCP1P13796 627 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 ANXA13P27216 316 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 ATF7IP2Q5U623 682 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 BRD2P25440 801 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 GTF2H1P32780 548 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 CACNB2Q08289 660 aaPredicted RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 SLC13A5Q86YT5 568 aaPredicted RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
RAD50-209ENST00000533482 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 KLK14Q9P0G3 267 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 TRAF3IP3Q9Y228 551 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
RAD50-209ENST00000533482 RGL2O15211 777 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 CALCAP01258 141 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 RRM1P23921 792 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 PBX1P40424 430 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 BCAR1P56945 870 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 MXD4Q14582 209 aaPredicted RBP13.13□□□□□ -0.31
RAD50-209ENST00000533482 CYP4A22Q5TCH4 519 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 SV2AQ7L0J3 742 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 MCUQ8NE86 351 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 CHST13Q8NET6 341 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 UBA3Q8TBC4 463 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 TATDN2Q93075 761 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
RAD50-209ENST00000533482 SLC13A1Q9BZW2 595 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 KITP10721 976 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
RAD50-209ENST00000533482 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
RAD50-209ENST00000533482 RNF19AQ9NV58 838 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms