RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 DLX2Q07687 328 aaPredicted RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 ELAVL2Q12926 359 aaKnown RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 ADAM15Q13444 863 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 TAS1R1Q7RTX1 841 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 FAM213AQ9BRX8 229 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 GPR62Q9BZJ7 368 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 FAM50BQ9Y247 325 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
UBASH3B-208ENST00000533451 REV3LO60673 3130 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 ANK1P16157 1881 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 ZNF202O95125 648 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 ADH1AP07327 375 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 NAB2Q15742 525 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 JADE1Q6IE81 842 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 DCLRE1AQ6PJP8 1040 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 PRSS55Q6UWB4 352 aaPredicted RBP12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 ALKAL1Q6UXT8 129 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 KRBA2Q6ZNG9 492 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 HS2ST1Q7LGA3 356 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 CASP10Q92851 521 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 KCNN1Q92952 543 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 TTPALQ9BTX7 342 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 CHMP5Q9NZZ3 219 aa12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
UBASH3B-208ENST00000533451 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 NCOR1O75376 2440 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 DLL1O00548 723 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 MEFVO15553 781 aaPredicted RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 GLP2RO95838 553 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 NFICP08651 508 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CNPP09543 421 aaKnown RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 IL9P15248 144 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 EPCAMP16422 314 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 RPL17P18621 184 aaKnown RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 ADSSP30520 456 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 SSTR3P32745 418 aaPredicted RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 LTBRP36941 435 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 BRCC3P46736 316 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CYP2J2P51589 502 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CREMQ03060 361 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 PSMD5Q16401 504 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 UPP1Q16831 310 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 PUS10Q3MIT2 529 aaKnown RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 KMT5BQ4FZB7 885 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CNNM4Q6P4Q7 775 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 BEST2Q8NFU1 509 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 VN1R2Q8NFZ6 395 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 NECAB3Q96P71 396 aaPredicted RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 KLHL5Q96PQ7 755 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CBWD1Q9BRT8 395 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 CPSF3Q9UKF6 684 aaKnown RBP12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 TTC28Q96AY4 2481 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 VWA8A3KMH1 1905 aa12.45□□□□□ -0.42
UBASH3B-208ENST00000533451 PLXNA3P51805 1871 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 UBE4BO95155 1302 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 CLIC2O15247 247 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 TEX28O15482 410 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 FAM189A1O60320 539 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 CLSTN1O94985 981 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 IL18RAPO95256 599 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 LDHAP00338 332 aaKnown RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 GLUD1P00367 558 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 MYL1P05976 194 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 GARTP22102 1010 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 RPL9P32969 192 aaKnown RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 DSG1Q02413 1049 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 SMAD4Q13485 552 aaKnown RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 COL19A1Q14993 1142 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 CTC1Q2NKJ3 1217 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 XKR4Q5GH76 650 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 RARS2Q5T160 578 aaKnown RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 ANKRD54Q6NXT1 300 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 ELMSAN1Q6PJG2 1045 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms