RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
NXF1-215ENST00000533440 ZSWIM3Q96MP5 696 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 CORO1BQ9BR76 489 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 LSM14BQ9BX40 385 aaKnown RBP8.63□□□□□ -1.03
NXF1-215ENST00000533440 SLKQ9H2G2 1235 aaPredicted RBP8.63□□□□□ -1.03
NXF1-215ENST00000533440 ARRDC1-AS1Q9H2J1 176 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 FZD8Q9H461 694 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 C2orf42Q9NWW7 574 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 SMG1Q96Q15 3661 aaKnown RBP8.63□□□□□ -1.03
NXF1-215ENST00000533440 SDK1Q7Z5N4 2213 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 IGF2RP11717 2491 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 C1QTNF9BB2RNN3 333 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 ZNF263O14978 683 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 TBX3O15119 743 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 AXIN1O15169 862 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 RECQL4O94761 1208 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 B3GAT3O94766 335 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 EPN2O95208 641 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 LYPLA2O95372 231 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 ATF2P15336 505 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 TKTP29401 623 aaKnown RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 HOXC13P31276 330 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 VIPR2P41587 438 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 EVCP57679 992 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 CYP4A11Q02928 519 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 FAM187BQ17R55 369 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 DGKKQ5KSL6 1271 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 GALNT17Q6IS24 598 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 Q6ZS52 159 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 PDZD4Q76G19 769 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 CEP68Q76N32 757 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 TCEAL8Q8IYN2 117 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 FAM177A1Q8N128 213 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 KCNB2Q92953 911 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 PDZD7Q9H5P4 517 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 PRMT7Q9NVM4 692 aaPredicted RBP8.62□□□□□ -1.03
NXF1-215ENST00000533440 WASF3Q9UPY6 502 aa8.62□□□□□ -1.03
NXF1-215ENST00000533440 SPAG17Q6Q759 2223 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 MYBPHLA2RUH7 354 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 HEPACAM2A8MVW5 462 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 N4BP3O15049 544 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CHADO15335 359 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 TRAPPC3O43617 180 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 SEC24AO95486 1093 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 GCFC2P16383 781 aaKnown RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 PDIA3P30101 505 aaKnown RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 ELF1P32519 619 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 RARRES1P49788 294 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CLCNKBP51801 687 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 EPHA5P54756 1037 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 FCHO2Q0JRZ9 810 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CCDC6Q16204 474 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 UPP1Q16831 310 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CYP4A22Q5TCH4 519 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 NCAPH2Q6IBW4 605 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 C3orf58Q8NDZ4 430 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 E2F7Q96AV8 911 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 UROC1Q96N76 676 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 HSD17B14Q9BPX1 270 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 POLR3FQ9H1D9 316 aaPredicted RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
NXF1-215ENST00000533440 PCDHGA5Q9Y5G8 931 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 INSL5Q9Y5Q6 135 aa8.61□□□□□ -1.03
NXF1-215ENST00000533440 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 TMEM8BA6NDV4 472 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 I3L4J1 428 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 PRRG1O14668 218 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 DEXIO95424 95 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 BRCC3P46736 316 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 SOX9P48436 509 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 SSRP1Q08945 709 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 CCINQ13939 588 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
NXF1-215ENST00000533440 TPGS2Q68CL5 300 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 NEK8Q86SG6 692 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 KBTBD6Q86V97 674 aa8.6□□□□□ -1.03
NXF1-215ENST00000533440 RALGPS2Q86X27 583 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms