RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 RPF1Q9H9Y2 349 aaKnown RBP32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 TBC1D7Q9P0N9 293 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 TUBGCP4Q9UGJ1 667 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 CFAP45Q9UL16 551 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 FRMD3A2A2Y4 597 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 LACTBL1A8MY62 500 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 RFPL2O75678 378 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 SPAG1Q07617 926 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 SLFN12LQ6IEE8 588 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 KIF12Q96FN5 646 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 RHOBTB2Q9BYZ6 727 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 TNMDQ9H2S6 317 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 CUEDC2Q9H467 287 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 OLFML3Q9NRN5 406 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 MTRRQ9UBK8 725 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 CPSF3Q9UKF6 684 aaKnown RBP32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 USTQ9Y2C2 406 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 NUB1Q9Y5A7 615 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 STYXL1Q9Y6J8 313 aa32.98■■■□□ 2.87
SSSCA1-207ENST00000533115 TISP43B9A030 160 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 ADAM12O43184 909 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 PAPLNO95428 1278 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 ADRB2P07550 413 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 COL9A1P20849 921 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 DNM1Q05193 864 aaKnown RBP32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 ZBTB6Q15916 424 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 ANKS3Q6ZW76 656 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 EDAQ92838 391 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 LRRC27Q9C0I9 530 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 PANK4Q9NVE7 773 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 ZDHHC7Q9NXF8 308 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 GTF3C5Q9Y5Q8 519 aaPredicted RBP32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 C2orf16Q68DN1 1984 aa32.97■■■□□ 2.87
SSSCA1-207ENST00000533115 PRR33A8MZF0 331 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 ME1P48163 572 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 ADALQ6DHV7 355 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 CCDC149Q6ZUS6 474 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 TDRD5Q8NAT2 981 aaKnown RBP32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 STAMQ92783 540 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 DHX58Q96C10 678 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 TSPAN18Q96SJ8 248 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 KBTBD4Q9NVX7 518 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 FBXW11Q9UKB1 542 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 UBQLN1Q9UMX0 589 aaKnown RBP32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 PCDHA7Q9UN72 937 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 BACE2Q9Y5Z0 518 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 DENND4AQ7Z401 1863 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 TRIOO75962 3097 aa32.96■■■□□ 2.87
SSSCA1-207ENST00000533115 GCNT3O95395 438 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 CYP3A5P20815 502 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 LRPAP1P30533 357 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 OR1D2P34982 312 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 RAB33AQ14088 237 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 L1TD1Q5T7N2 865 aaKnown RBP32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 CD302Q8IX05 232 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 IQUBQ8NA54 791 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 SMG7Q92540 1137 aaKnown RBP32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 ZNF707Q96C28 371 aaPredicted RBP32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 ACCSQ96QU6 501 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 IKZF4Q9H2S9 585 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 AGO2Q9UKV8 859 aaKnown RBP32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 EXOC7Q9UPT5 735 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 PCDHB13Q9Y5F0 798 aa32.95■■■□□ 2.87
SSSCA1-207ENST00000533115 SYN3O14994 580 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 XPOTO43592 962 aaKnown RBP32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 ZMYND10O75800 440 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 ZXDAP98168 799 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 KCNA1Q09470 495 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 CCDC65Q8IXS2 484 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 ZDHHC14Q8IZN3 488 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 CDY1Q9Y6F8 540 aa32.94■■■□□ 2.86
SSSCA1-207ENST00000533115 MCM4P33991 863 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 ACOT2P49753 483 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 CASP5P51878 434 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 ALCAMQ13740 583 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 PTPN21Q16825 1174 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 VARS2Q5ST30 1063 aaKnown RBP32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 RSPO2Q6UXX9 243 aaPredicted RBP32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 PLCD3Q8N3E9 789 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 TMEM130Q8N3G9 435 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 FAM212AQ96EL1 285 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 SUSD3Q96L08 255 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 PRKD2Q9BZL6 878 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 RCOR1Q9UKL0 485 aa32.93■■■□□ 2.86
SSSCA1-207ENST00000533115 AMPD3Q01432 767 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 POSTNQ15063 836 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 LIN9Q5TKA1 542 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 OTOP3Q7RTS5 596 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 POMGNT1Q8WZA1 660 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 ACSF2Q96CM8 615 aaPredicted RBP32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 FGFBP2Q9BYJ0 223 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 PIDD1Q9HB75 910 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 WDR6Q9NNW5 1121 aaKnown RBP32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 FAM13BQ9NYF5 915 aa32.92■■■□□ 2.86
SSSCA1-207ENST00000533115 ADSSP30520 456 aa32.91■■■□□ 2.86
SSSCA1-207ENST00000533115 RESP18Q5W5W9 173 aa32.91■■■□□ 2.86
SSSCA1-207ENST00000533115 JADE1Q6IE81 842 aa32.91■■■□□ 2.86
SSSCA1-207ENST00000533115 TRIM9Q9C026 710 aa32.91■■■□□ 2.86
SSSCA1-207ENST00000533115 ZDHHC9Q9Y397 364 aa32.91■■■□□ 2.86
SSSCA1-207ENST00000533115 POLR2DO15514 142 aaKnown RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms