RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MDM2Q00987 491 aaPredicted RBP15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 TRIM59Q8IWR1 403 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 ATP11CQ8NB49 1132 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 C7orf25Q9BPX7 421 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 ANGPTL2Q9UKU9 493 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 A0A087WUV0 522 aaPredicted RBP15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 MSH4O15457 936 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 LAMB3Q13751 1172 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 PDE1CQ14123 709 aaPredicted RBP15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 MORF4L2Q15014 288 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 TBCCQ15814 346 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 PPM1NQ8N819 430 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 SYT2Q8N9I0 419 aaPredicted RBP15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 UBA3Q8TBC4 463 aa15.59■□□□□ 0.09
PCDHA9-202ENST00000532602 CCDC195A0A1B0GUA6 201 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 ACTR2P61160 394 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 POU5F1BQ06416 359 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 GPS1Q13098 491 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 LAMC2Q13753 1193 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 LBRQ14739 615 aaKnown RBP15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 RASSF3Q86WH2 238 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 PRRG1O14668 218 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 PSMD3O43242 534 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 PPP4CP60510 307 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 GLRA4Q5JXX5 417 aa15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 AFF4Q9UHB7 1163 aaKnown RBP15.58■□□□□ 0.09
PCDHA9-202ENST00000532602 UBA6A0AVT1 1052 aaPredicted RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 BACE1P56817 501 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 GTF2H3Q13889 308 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 CASP8Q14790 479 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 FAM133BQ5BKY9 247 aaKnown RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 DDX53Q86TM3 631 aaKnown RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 CCNYL1Q8N7R7 359 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 GPRC5CQ9NQ84 441 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 RDM1Q8NG50 284 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 CPB2Q96IY4 423 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 C17orf102A2RUQ5 167 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 VTNP04004 478 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 SNRPFP62306 86 aaKnown RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 GJB7Q6PEY0 223 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 TSSK1BQ9BXA7 367 aa15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 MRPL46Q9H2W6 279 aaKnown RBP15.58■□□□□ 0.08
PCDHA9-202ENST00000532602 ESYT3A0FGR9 886 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 KITP10721 976 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 HADHAP40939 763 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ORC1Q13415 861 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 SV2CQ496J9 727 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 LRRC43Q8N309 656 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 NRBF2Q96F24 287 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ATXN7L3BQ96GX2 97 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 OSBPL9Q96SU4 736 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ACTR5Q9H9F9 607 aaPredicted RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 AAASQ9NRG9 546 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 KRT14P02533 472 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 PAN2Q504Q3 1202 aaKnown RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ARP10275 920 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 VCAM1P19320 739 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 DEUP1Q05D60 604 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 MGAT5BQ3V5L5 792 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 USP33Q8TEY7 942 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ZNF512Q96ME7 567 aaPredicted RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 PPARGC1AQ9UBK2 798 aaKnown RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ITM2BQ9Y287 266 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 RTN2O75298 545 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 SKIP12755 728 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 FMO5P49326 533 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 CAPRIN1Q14444 709 aaKnown RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 RAPGEF5Q92565 580 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 PPP1R2P1Q96PQ5 205 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 DDX47Q9H0S4 455 aaKnown RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 GBA2Q9HCG7 927 aaPredicted RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 FAF1Q9UNN5 650 aaPredicted RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 NUMBP49757 651 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 ATN1P54259 1190 aaPredicted RBP15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 APEX2Q9UBZ4 518 aa15.57■□□□□ 0.08
PCDHA9-202ENST00000532602 RNF135Q8IUD6 432 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 C3orf70A6NLC5 250 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 FOXP2O15409 715 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 ATMINO43313 823 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 GAS2O43903 313 aaKnown RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 FBXW4P57775 412 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 CCDC15Q0P6D6 951 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 PLEKHH3Q7Z736 793 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 FOPNLQ96NB1 174 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 MCEEQ96PE7 176 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 PCDHGB4Q9UN71 923 aa15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 WTIPA6NIX2 430 aaPredicted RBP15.56■□□□□ 0.08
PCDHA9-202ENST00000532602 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms