RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
CTSB-224ENST00000532392 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
CTSB-224ENST00000532392 UHRF1Q96T88 793 aaPredicted RBP15.79■□□□□ 0.12
CTSB-224ENST00000532392 TTPALQ9BTX7 342 aa15.79■□□□□ 0.12
CTSB-224ENST00000532392 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
CTSB-224ENST00000532392 FNIP2Q9P278 1114 aa15.79■□□□□ 0.12
CTSB-224ENST00000532392 UBQLN1Q9UMX0 589 aaKnown RBP15.79■□□□□ 0.12
CTSB-224ENST00000532392 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 TEX28O15482 410 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 XPOTO43592 962 aaKnown RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 KLRC4O43908 158 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 ZNF202O95125 648 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 LDHAP00338 332 aaKnown RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 ADH1AP07327 375 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 EPCAMP16422 314 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 CYP3A5P20815 502 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 CLCN4P51793 760 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 CREMQ03060 361 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 SMAD2Q15796 467 aaKnown RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 RTP2Q5QGT7 225 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 SYCE2Q6PIF2 218 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 CRELD2Q6UXH1 353 aaPredicted RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 C3orf58Q8NDZ4 430 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 PIK3R5Q8WYR1 880 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 S1PR5Q9H228 398 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 ASB7Q9H672 318 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 DERAQ9Y315 318 aa15.78■□□□□ 0.12
CTSB-224ENST00000532392 TCF20Q9UGU0 1960 aaKnown RBP15.78■□□□□ 0.12
CTSB-224ENST00000532392 FGFR3P22607 806 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 LRPAP1P30533 357 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 HOXD13P35453 343 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 BRCC3P46736 316 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 JADE1Q6IE81 842 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 ARMCX5Q6P1M9 558 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 PDXDC1Q6P996 788 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 KRBA2Q6ZNG9 492 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 SCFD1Q8WVM8 642 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 SAAL1Q96ER3 474 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 NECAB3Q96P71 396 aaPredicted RBP15.77■□□□□ 0.12
CTSB-224ENST00000532392 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 PCIF1Q9H4Z3 704 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 EXOC1Q9NV70 894 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 DZANK1Q9NVP4 752 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 NUB1Q9Y5A7 615 aa15.77■□□□□ 0.12
CTSB-224ENST00000532392 TTC28Q96AY4 2481 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 UBE4BO95155 1302 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 KIAA0391O15091 583 aaKnown RBP15.76■□□□□ 0.11
CTSB-224ENST00000532392 EXTL3O43909 919 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 C1RP00736 705 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 PSMD2Q13200 908 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 TMEM132DQ14C87 1099 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 KMT5BQ4FZB7 885 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 PRSS55Q6UWB4 352 aaPredicted RBP15.76■□□□□ 0.11
CTSB-224ENST00000532392 ZSWIM2Q8NEG5 633 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 BEST2Q8NFU1 509 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 LNX1Q8TBB1 728 aaPredicted RBP15.76■□□□□ 0.11
CTSB-224ENST00000532392 FBXL18Q96ME1 805 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 C2CD2Q9Y426 696 aa15.76■□□□□ 0.11
CTSB-224ENST00000532392 USP15Q9Y4E8 981 aaPredicted RBP15.76■□□□□ 0.11
CTSB-224ENST00000532392 GOLGA8IPA6NC78 632 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 GOLGA8JA6NMD2 632 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 I3L4J1 428 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 TGFB1I1O43294 461 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 IL18RAPO95256 599 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 GLUD1P00367 558 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 RPN1P04843 607 aaKnown RBP15.75■□□□□ 0.11
CTSB-224ENST00000532392 NFICP08651 508 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 RPL17P18621 184 aaKnown RBP15.75■□□□□ 0.11
CTSB-224ENST00000532392 TKTP29401 623 aaKnown RBP15.75■□□□□ 0.11
CTSB-224ENST00000532392 GUCY2FP51841 1108 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
CTSB-224ENST00000532392 ITIH3Q06033 890 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 PSMD5Q16401 504 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 BMT2Q1RMZ1 405 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 KANK3Q6NY19 840 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 NELFCDQ8IXH7 590 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 FMR1NBQ8N0W7 255 aaPredicted RBP15.75■□□□□ 0.11
CTSB-224ENST00000532392 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 TMEM130Q8N3G9 435 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 SUSD6Q92537 303 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 CCDC34Q96HJ3 373 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 CLSTN3Q9BQT9 956 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 APOL5Q9BWW9 433 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 PRKAG3Q9UGI9 489 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 DPP7Q9UHL4 492 aa15.75■□□□□ 0.11
CTSB-224ENST00000532392 SYN3O14994 580 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 MCM4P33991 863 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 DPYDQ12882 1025 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 STK4Q13043 487 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 KNOP1Q1ED39 458 aaKnown RBP15.74■□□□□ 0.11
CTSB-224ENST00000532392 ANKS3Q6ZW76 656 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 HS2ST1Q7LGA3 356 aa15.74■□□□□ 0.11
CTSB-224ENST00000532392 PALB2Q86YC2 1186 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms