RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PSMD5Q16401 504 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 ZBTB41Q5SVQ8 909 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 CD302Q8IX05 232 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 LNX1Q8TBB1 728 aaPredicted RBP25.01■■□□□ 1.59
CAPN1-222ENST00000532285 HDAC7Q8WUI4 952 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 KIF12Q96FN5 646 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 C7orf25Q9BPX7 421 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 MAN1C1Q9NR34 630 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 AGO2Q9UKV8 859 aaKnown RBP25.01■■□□□ 1.59
CAPN1-222ENST00000532285 KCNH3Q9ULD8 1083 aa25.01■■□□□ 1.59
CAPN1-222ENST00000532285 LOC730098B7Z3J9 87 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 TISP43B9A030 160 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 XPOTO43592 962 aaKnown RBP25■■□□□ 1.59
CAPN1-222ENST00000532285 MYBP10242 640 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 RPL17P18621 184 aaKnown RBP25■■□□□ 1.59
CAPN1-222ENST00000532285 CASP5P51878 434 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 ASIC1P78348 528 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 KCNA1Q09470 495 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 ZBTB6Q15916 424 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 STXBP4Q6ZWJ1 553 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 PALB2Q86YC2 1186 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 GLYCTKQ8IVS8 523 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 POMGNT1Q8WZA1 660 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 PLEKHA4Q9H4M7 779 aa25■■□□□ 1.59
CAPN1-222ENST00000532285 UBQLN1Q9UMX0 589 aaKnown RBP25■■□□□ 1.59
CAPN1-222ENST00000532285 CYP3A5P20815 502 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 BRCC3P46736 316 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 POU5F1Q01860 360 aaKnown RBP24.99■■□□□ 1.59
CAPN1-222ENST00000532285 SPAG1Q07617 926 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 ATAT1Q5SQI0 421 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 KANK3Q6NY19 840 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 TMC5Q6UXY8 1006 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 SYCP3Q8IZU3 236 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 KHSRPQ92945 711 aaKnown RBP eCLIP24.99■■□□□ 1.59
CAPN1-222ENST00000532285 FAM212AQ96EL1 285 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 CLSTN3Q9BQT9 956 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 SCAND2PQ9GZW5 306 aaPredicted RBP24.99■■□□□ 1.59
CAPN1-222ENST00000532285 IKZF4Q9H2S9 585 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 TUBGCP4Q9UGJ1 667 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 NUB1Q9Y5A7 615 aa24.99■■□□□ 1.59
CAPN1-222ENST00000532285 PI4K2BG5E9Z4 385 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 TGM5O43548 720 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 CMA1P23946 247 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 ADSSP30520 456 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 ACOT2P49753 483 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 LILRA6Q6PI73 481 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 CEP57L1Q8IYX8 460 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 CMASQ8NFW8 434 aaPredicted RBP24.98■■□□□ 1.59
CAPN1-222ENST00000532285 RPGRIP1Q96KN7 1286 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 TMEM206Q9H813 350 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 CDH22Q9UJ99 828 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 DENND4AQ7Z401 1863 aa24.98■■□□□ 1.59
CAPN1-222ENST00000532285 I3L4J1 428 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 WEE2P0C1S8 567 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 SPATA31D3P0C874 917 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 TKTP29401 623 aaKnown RBP24.97■■□□□ 1.59
CAPN1-222ENST00000532285 LRPAP1P30533 357 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 C15orf39Q6ZRI6 1047 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 SPATA31D4Q6ZUB0 917 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 ANKS3Q6ZW76 656 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 GPR149Q86SP6 731 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 CHAMP1Q96JM3 812 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 FGFBP2Q9BYJ0 223 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 POMKQ9H5K3 350 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 ASB7Q9H672 318 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 EPHX3Q9H6B9 360 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 DERAQ9Y315 318 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 NR2E1Q9Y466 385 aa24.97■■□□□ 1.59
CAPN1-222ENST00000532285 PRPF6O94906 941 aaKnown RBP24.96■■□□□ 1.59
CAPN1-222ENST00000532285 SLFN14P0C7P3 912 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 ALADP13716 330 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 GARTP22102 1010 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 JADE1Q6IE81 842 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 CYP26C1Q6V0L0 522 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 RNF135Q8IUD6 432 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 C1QTNF1Q9BXJ1 281 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 MTRRQ9UBK8 725 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 BACE2Q9Y5Z0 518 aa24.96■■□□□ 1.59
CAPN1-222ENST00000532285 CCDC195A0A1B0GUA6 201 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 SYN3O14994 580 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 LDHAP00338 332 aaKnown RBP24.95■■□□□ 1.58
CAPN1-222ENST00000532285 MCM4P33991 863 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 AFMP43652 599 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 SPATA1Q5VX52 437 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 CRELD2Q6UXH1 353 aaPredicted RBP24.95■■□□□ 1.58
CAPN1-222ENST00000532285 UNC13DQ70J99 1090 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 KREMEN2Q8NCW0 462 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 BEST2Q8NFU1 509 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 SUSD3Q96L08 255 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 RHOBTB2Q9BYZ6 727 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 USP25Q9UHP3 1055 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 SERTAD1Q9UHV2 236 aa24.95■■□□□ 1.58
CAPN1-222ENST00000532285 A0A1B0GVL5 298 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 PVALEFA0A1B0GWK0 134 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 EIF3DO15371 548 aaKnown RBP eCLIP24.94■■□□□ 1.58
CAPN1-222ENST00000532285 PFKFB1P16118 471 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 OR1D2P34982 312 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 RAB33AQ14088 237 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 TMEM132DQ14C87 1099 aa24.94■■□□□ 1.58
CAPN1-222ENST00000532285 FAM26FQ5R3K3 315 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms