RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CALML4Q96GE6 196 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLC39A13Q96H72 371 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF396Q96N95 335 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 FERD3LQ96RJ6 166 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 USP28Q96RU2 1077 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PLIN2Q99541 437 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 MMTAG2Q9BU76 263 aaKnown RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PHACTR1Q9C0D0 580 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 NT5C3AQ9H0P0 336 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PRDM12Q9H4Q4 367 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CERS4Q9HA82 394 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 IFT122Q9HBG6 1241 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 GPRC5CQ9NQ84 441 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 CHST12Q9NRB3 414 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 DACT1Q9NYF0 836 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PIN4Q9Y237 131 aaKnown RBP6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 STXBP5LQ9Y2K9 1186 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 PCDHB7Q9Y5E2 793 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 LAMA3Q16787 3333 aa6.37□□□□□ -1.39
HMGB1P42-201ENST00000532126 ADGRA3Q8IWK6 1321 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 LRRIQ4A6NIV6 560 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 INO80B-WBP1J3KQ70 363 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLC26A4O43511 780 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MICAL2O94851 1124 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 ERLIN2O94905 339 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 KIF4AO95239 1232 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 F13A1P00488 732 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GLRA2P23416 452 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MARCKSP29966 332 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 TXLNAP40222 546 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GUCY2FP51841 1108 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 PTENP60484 403 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM189BP81408 668 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 LMNB2Q03252 620 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GRIN1Q05586 938 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MCL1Q07820 350 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GRB10Q13322 594 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 BTG3Q14201 252 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GRM2Q14416 872 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 SLC39A14Q15043 492 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 STK38Q15208 465 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 PCBP1Q15365 356 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 LONRF2Q1L5Z9 754 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 HYIQ5T013 277 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 SH3PXD2AQ5TCZ1 1133 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 TWF2Q6IBS0 349 aaKnown RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 KCNK18Q7Z418 384 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZBTB8OSQ8IWT0 167 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 CMTR2Q8IYT2 770 aaKnown RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 CRIPAKQ8N1N5 446 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GOLM1Q8NBJ4 401 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 RNF169Q8NCN4 708 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 DEPTORQ8TB45 409 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 PNMA5Q96PV4 448 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 TGS1Q96RS0 853 aaKnown RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 GAS2L1Q99501 681 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 ARPC5LQ9BPX5 153 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 NFKBIZQ9BYH8 718 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 CSRNP2Q9H175 543 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 ELAC1Q9H777 363 aaKnown RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MINDY3Q9H8M7 445 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 CASS4Q9NQ75 786 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 TMEM161AQ9NX61 479 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 FBXO2Q9UK22 296 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MTUS1Q9ULD2 1270 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 SRPRBQ9Y5M8 271 aaKnown RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 TRIP12Q14669 1992 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P42-201ENST00000532126 A0A0U1RQF3 1178 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 TBKBP1A7MCY6 615 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RFXAPO00287 272 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SIAH2O43255 324 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 TSPAN1O60635 241 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 HIP1RO75146 1068 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 EOMESO95936 686 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PLA2G4BP0C869 781 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 FGFR1P11362 822 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PLCG1P19174 1290 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 POU3F3P20264 500 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 BDNFP23560 247 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 GUCY2CP25092 1073 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 AXLP30530 894 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 NAMPTP43490 491 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ZNF165P49910 485 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 GATMP50440 423 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 RAB27AP51159 221 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 NEK2P51955 445 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 ERVK-21P61565 698 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PKP1Q13835 747 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 KARSQ15046 597 aaKnown RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 TMEM119Q4V9L6 283 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 PAN2Q504Q3 1202 aaKnown RBP6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 SPECC1Q5M775 1068 aa6.35□□□□□ -1.39
HMGB1P42-201ENST00000532126 FBXW10Q5XX13 1052 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms