RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TCEAL8Q8IYN2 117 aa14.57□□□□□ -0.08
AMBRA1-210ENST00000531542 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
AMBRA1-210ENST00000531542 SUSD3Q96L08 255 aa14.57□□□□□ -0.08
AMBRA1-210ENST00000531542 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
AMBRA1-210ENST00000531542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.57□□□□□ -0.08
AMBRA1-210ENST00000531542 RIF1Q5UIP0 2472 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 CCL16O15467 120 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 CLDN3O15551 220 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 CLTAP09496 248 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 PLA2G4BP0C869 781 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 ABCD1P33897 745 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 BRCC3P46736 316 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 NCKAP1LP55160 1127 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 OSTNP61366 133 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 ROR1Q01973 937 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 NOLC1Q14978 699 aaKnown RBP eCLIP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 PABPC1LQ4VXU2 614 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 ARSHQ5FYA8 562 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 VARS2Q5ST30 1063 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 BRAPQ7Z569 592 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 FGF14Q92915 247 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 SHDQ96IW2 340 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 OXCT2Q9BYC2 517 aaPredicted RBP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 ARHGEF3Q9NR81 526 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 GDE1Q9NZC3 331 aa14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 DNMT3BQ9UBC3 853 aaKnown RBP14.56□□□□□ -0.08
AMBRA1-210ENST00000531542 PTPRZ1P23471 2315 aaPredicted RBP14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 TTC26A0AVF1 554 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 PIGRP01833 764 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 ADRB2P07550 413 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 CYP3A5P20815 502 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 LRPAP1P30533 357 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 ZNF131P52739 623 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 NTHL1P78549 312 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 ANGPT1Q15389 498 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 ZBTB6Q15916 424 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 PARM1Q6UWI2 310 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 NPAS3Q8IXF0 933 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 APPL2Q8NEU8 664 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 ZBTB45Q96K62 511 aaPredicted RBP14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 SEMA4AQ9H3S1 761 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 TBC1D17Q9HA65 648 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 DLGAP2Q9P1A6 1054 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 SIT1Q9Y3P8 196 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 NUB1Q9Y5A7 615 aa14.55□□□□□ -0.08
AMBRA1-210ENST00000531542 VWA8A3KMH1 1905 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 WDR27A2RRH5 827 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 PRR23AA6NEV1 266 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 I3L4J1 428 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 M0QZQ0 153 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 ECI2O75521 394 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 PTPN2P17706 415 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 PAX3P23760 479 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 ELF1P32519 619 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 LONP1P36776 959 aaKnown RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 UBA7P41226 1012 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 GPC5P78333 572 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 PFKPQ01813 784 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 PRKCQQ04759 706 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 HAUS6Q7Z4H7 955 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 ITFG1Q8TB96 612 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 NKD2Q969F2 451 aaPredicted RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 C18orf25Q96B23 403 aaPredicted RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 CALML4Q96GE6 196 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 RPP25Q9BUL9 199 aaKnown RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 DDX23Q9BUQ8 820 aaKnown RBP14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 OSBPL6Q9BZF3 934 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 ANKFY1Q9P2R3 1169 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 FBXL5Q9UKA1 691 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 CA14Q9ULX7 337 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
AMBRA1-210ENST00000531542 FAM189A1O60320 539 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 OAZ2O95190 189 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 RHOP08100 348 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 RAD51AP2Q09MP3 1159 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 LARP1BQ659C4 914 aaKnown RBP14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 ZNF280DQ6N043 979 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 ASCL5Q7RTU5 278 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 CD302Q8IX05 232 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 BEST2Q8NFU1 509 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 BORCS6Q96GS4 357 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 TBC1D32Q96NH3 1257 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 HAPLN2Q9GZV7 340 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 HCFC1R1Q9NWW0 138 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 AFF4Q9UHB7 1163 aaKnown RBP14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 TBX20Q9UMR3 447 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 UBQLN1Q9UMX0 589 aaKnown RBP14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 PCDHB8Q9UN66 801 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 MRPS23Q9Y3D9 190 aaKnown RBP14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 MYO15AQ9UKN7 3530 aa14.53□□□□□ -0.08
AMBRA1-210ENST00000531542 STK25O00506 426 aa14.52□□□□□ -0.09
AMBRA1-210ENST00000531542 PRRG1O14668 218 aa14.52□□□□□ -0.09
AMBRA1-210ENST00000531542 ZNF197O14709 1029 aa14.52□□□□□ -0.09
AMBRA1-210ENST00000531542 XPOTO43592 962 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms