RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 GOLGA8JA6NMD2 632 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 ZNF202O95125 648 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 SPATA31D3P0C874 917 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 SMAD4Q13485 552 aaKnown RBP15.73■□□□□ 0.11
FOXR1-202ENST00000531539 ZBTB6Q15916 424 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 RTP2Q5QGT7 225 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 JADE1Q6IE81 842 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 KANK3Q6NY19 840 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 SYCE2Q6PIF2 218 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 SPATA31D4Q6ZUB0 917 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 NELFCDQ8IXH7 590 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 ZSWIM2Q8NEG5 633 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 SAAL1Q96ER3 474 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 S1PR5Q9H228 398 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 TUBGCP4Q9UGJ1 667 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 UBQLN1Q9UMX0 589 aaKnown RBP15.73■□□□□ 0.11
FOXR1-202ENST00000531539 NUB1Q9Y5A7 615 aa15.73■□□□□ 0.11
FOXR1-202ENST00000531539 TCHHQ07283 1943 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 TMEM189-UBE2V1I3L0A0 370 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 XPOTO43592 962 aaKnown RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 ADH1AP07327 375 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 ADRB2P07550 413 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 HOXB8P17481 243 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 GARTP22102 1010 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 HOXD13P35453 343 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 CLCN4P51793 760 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 GUCY2FP51841 1108 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 CRELD2Q6UXH1 353 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 KRBA2Q6ZNG9 492 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 LNX1Q8TBB1 728 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 FBXL18Q96ME1 805 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 TSPAN18Q96SJ8 248 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 CBWD1Q9BRT8 395 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 FNIP2Q9P278 1114 aa15.72■□□□□ 0.11
FOXR1-202ENST00000531539 USP15Q9Y4E8 981 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-202ENST00000531539 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 KLRC4O43908 158 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 CYP3A5P20815 502 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 FGFR3P22607 806 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 ANP32AP39687 249 aaKnown RBP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 EHHADHQ08426 723 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 SMAD2Q15796 467 aaKnown RBP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 PSMD5Q16401 504 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 KMT5BQ4FZB7 885 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 RARS2Q5T160 578 aaKnown RBP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 ARMCX5Q6P1M9 558 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.11
FOXR1-202ENST00000531539 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 SMRP1Q8NCR6 262 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 BEST2Q8NFU1 509 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 CLSTN3Q9BQT9 956 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 ASB7Q9H672 318 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 UNC80Q8N2C7 3258 aa15.71■□□□□ 0.11
FOXR1-202ENST00000531539 TNFRSF10AO00220 468 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 CLIC2O15247 247 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 EXTL3O43909 919 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 RPN1P04843 607 aaKnown RBP15.7■□□□□ 0.1
FOXR1-202ENST00000531539 NFICP08651 508 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 WEE2P0C1S8 567 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 TKTP29401 623 aaKnown RBP15.7■□□□□ 0.1
FOXR1-202ENST00000531539 LRPAP1P30533 357 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 SSTR3P32745 418 aaPredicted RBP15.7■□□□□ 0.1
FOXR1-202ENST00000531539 MCM4P33991 863 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 CREMQ03060 361 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 STK4Q13043 487 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 PSMD2Q13200 908 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 TMEM132DQ14C87 1099 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 SPATA1Q5VX52 437 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 CES5AQ6NT32 575 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 PIK3R5Q8WYR1 880 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 DZANK1Q9NVP4 752 aa15.7■□□□□ 0.1
FOXR1-202ENST00000531539 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
FOXR1-202ENST00000531539 TGM5O43548 720 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 IL18RAPO95256 599 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 GLUD1P00367 558 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 MYL1P05976 194 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 OR1D2P34982 312 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 POU5F1Q01860 360 aaKnown RBP15.69■□□□□ 0.1
FOXR1-202ENST00000531539 ITIH3Q06033 890 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 TMC5Q6UXY8 1006 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 GJD3Q8N144 294 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 GPD1LQ8N335 351 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 RDH13Q8NBN7 331 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 CCDC47Q96A33 483 aaKnown RBP15.69■□□□□ 0.1
FOXR1-202ENST00000531539 ADAM7Q9H2U9 754 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 CD320Q9NPF0 282 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 DPP3Q9NY33 737 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 DERAQ9Y315 318 aa15.69■□□□□ 0.1
FOXR1-202ENST00000531539 CITO14578 2027 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms