RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 H7C4K7 107 aa24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 KRT18P05783 430 aaKnown RBP24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 LONP1P36776 959 aaKnown RBP24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 HTR4Q13639 388 aa24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 MYCT1Q8N699 235 aa24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 PLEKHA5Q9HAU0 1116 aa24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 CA14Q9ULX7 337 aa24.32■■□□□ 1.48
TRAPPC4-210ENST00000531290 PI15O43692 258 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 FAM13AO94988 1023 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 CLTAP09496 248 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 SCP2P22307 547 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 NCKAP1LP55160 1127 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 ARPP19P56211 112 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 SF3A1Q15459 793 aaKnown RBP24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 SLC8B1Q6J4K2 584 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 ST13P5Q8NFI4 369 aaPredicted RBP24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 ZNF461Q8TAF7 563 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 FGF13Q92913 245 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 REEP2Q9BRK0 252 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 BACH2Q9BYV9 841 aa24.31■■□□□ 1.48
TRAPPC4-210ENST00000531290 MYO10Q9HD67 2058 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 VPS37CA5D8V6 355 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 PRRG1O14668 218 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 MEFVO15553 781 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 PDCP20941 246 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 MARCKSP29966 332 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 MCM4P33991 863 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 LIG4P49917 911 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 ROR1Q01973 937 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 KYAT1Q16773 422 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 PABPC1LQ4VXU2 614 aaKnown RBP24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 MTSS1LQ765P7 747 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 APPL2Q8NEU8 664 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 ITFG1Q8TB96 612 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 GPR152Q8TDT2 470 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 ZHX3Q9H4I2 956 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 PARVGQ9HBI0 331 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 DNMT3BQ9UBC3 853 aaKnown RBP24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 KCNH3Q9ULD8 1083 aa24.3■■□□□ 1.48
TRAPPC4-210ENST00000531290 KRBA1A5PL33 1030 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 LRG1P02750 347 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 PLCG1P19174 1290 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 MCM6Q14566 821 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 KARSQ15046 597 aaKnown RBP24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 PARM1Q6UWI2 310 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 SUSD3Q96L08 255 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 HCFC1R1Q9NWW0 138 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 TBX20Q9UMR3 447 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 PLXNA3P51805 1871 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 DENND4AQ7Z401 1863 aa24.29■■□□□ 1.48
TRAPPC4-210ENST00000531290 HNRNPDLO14979 420 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 ABLIM3O94929 683 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 CXCL8P10145 99 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 MRPL58Q14197 206 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 CTXN3Q4LDR2 81 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 RAD54LQ92698 747 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 FGF14Q92915 247 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 KCNN1Q92952 543 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 KIF12Q96FN5 646 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 RPP25Q9BUL9 199 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 HAPLN2Q9GZV7 340 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 CYP4F11Q9HBI6 524 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 SLC2A4RGQ9NR83 387 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 BLOC1S4Q9NUP1 217 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 TUBGCP4Q9UGJ1 667 aa24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 MRPS23Q9Y3D9 190 aaKnown RBP24.28■■□□□ 1.48
TRAPPC4-210ENST00000531290 K7ENM7 598 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 TRAK2O60296 914 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 TBC1D4O60343 1298 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 GFRA3O60609 400 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 TBCAO75347 108 aaKnown RBP24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 ATF2P15336 505 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 PTPN2P17706 415 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 GRIN1Q05586 938 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 PPP2R3AQ06190 1150 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 SPAG1Q07617 926 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 CUL4AQ13619 759 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 CCDC105Q8IYK2 499 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 DTWD2Q8NBA8 298 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 TBC1D17Q9HA65 648 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 ARHGEF3Q9NR81 526 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 FBXL5Q9UKA1 691 aa24.27■■□□□ 1.48
TRAPPC4-210ENST00000531290 TTC26A0AVF1 554 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 ARHGEF37A1IGU5 675 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 WDR27A2RRH5 827 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 XPOTO43592 962 aaKnown RBP24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 ABCD1P33897 745 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 DDIT3P35638 169 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZNF131P52739 623 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 TPGS2Q68CL5 300 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZNF280DQ6N043 979 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 LRRC15Q8TF66 581 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 DDX12PQ92771 950 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 RPF1Q9H9Y2 349 aaKnown RBP24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 UBQLN1Q9UMX0 589 aaKnown RBP24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 PCDHB8Q9UN66 801 aa24.26■■□□□ 1.47
TRAPPC4-210ENST00000531290 OGTO15294 1046 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 RHOP08100 348 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 CYP3A5P20815 502 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms