RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 EPC1Q9H2F5 836 aa10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 POLD4Q9HCU8 107 aa10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 PARD6AQ9NPB6 346 aa10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 PRMT8Q9NR22 394 aaPredicted RBP10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 HEBP1Q9NRV9 189 aa10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 FRYQ5TBA9 3013 aa10.15□□□□□ -0.78
CHMP4A-205ENST00000531158 LAMA1P25391 3075 aa10.15□□□□□ -0.79
CHMP4A-205ENST00000531158 SPTLC1O15269 473 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 LAMTOR5O43504 91 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 MARCH6O60337 910 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 ECI2O75521 394 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 CDKL5O76039 1030 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 PROS1P07225 676 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 RHOP08100 348 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 DDIT3P35638 169 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 KRT2P35908 639 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 BRCC3P46736 316 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 MTAPQ13126 283 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 PRPF4BQ13523 1007 aaKnown RBP10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 UPP1Q16831 310 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 NT5DC1Q5TFE4 455 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 TANGO2Q6ICL3 276 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 TMEM130Q8N3G9 435 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 CEP120Q8N960 986 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 TCEAL4Q96EI5 215 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 MCRS1Q96EZ8 462 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 ORC3Q9UBD5 711 aaPredicted RBP10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 KCNH3Q9ULD8 1083 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 GDAQ9Y2T3 454 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 PCDHGA2Q9Y5H1 932 aa10.14□□□□□ -0.79
CHMP4A-205ENST00000531158 TCHHQ07283 1943 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ARHGEF37A1IGU5 675 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 WDR27A2RRH5 827 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ACKR2O00590 384 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 N4BP3O15049 544 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 TBC1D4O60343 1298 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 NEMFO60524 1076 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 JAK2O60674 1132 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 XYLBO75191 536 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 SEC24AO95486 1093 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 PRKCBP05771 671 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 PTMSP20962 102 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 RPS9P46781 194 aaKnown RBP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ROR1Q01973 937 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 GRM2Q14416 872 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ECM1Q16610 540 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ME3Q16798 604 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 UVSSAQ2YD98 709 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 WDR44Q5JSH3 913 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 SLC8B1Q6J4K2 584 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 DIS3L2Q8IYB7 885 aaKnown RBP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ZSCAN32Q9NX65 697 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 MRPS23Q9Y3D9 190 aaKnown RBP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 BACE2Q9Y5Z0 518 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 ZNF638Q14966 1978 aaKnown RBP10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 WDFY3Q8IZQ1 3526 aa10.13□□□□□ -0.79
CHMP4A-205ENST00000531158 SCN1AP35498 2009 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 SPEGQ15772 3267 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 SMIM28A0A1B0GU29 152 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 MOSPD3O75425 235 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 B3GAT3O94766 335 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ABLIM3O94929 683 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 XBP1P17861 261 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 LIG1P18858 919 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 CYP11B2P19099 503 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 HOXC13P31276 330 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 NAMPTP43490 491 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 FOSBP53539 338 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 PFKPQ01813 784 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ELAVL2Q12926 359 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 XKR4Q5GH76 650 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 FAM78AQ5JUQ0 283 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ZBTB41Q5SVQ8 909 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ALKAL1Q6UXT8 129 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 GTF3C6Q969F1 213 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ZSWIM3Q96MP5 696 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 CCDC43Q96MW1 224 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 ZMAT2Q96NC0 199 aaKnown RBP10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 POLR3CQ9BUI4 534 aaPredicted RBP10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 TUFT1Q9NNX1 390 aa10.12□□□□□ -0.79
CHMP4A-205ENST00000531158 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 K7ELQ4 463 aaPredicted RBP10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ARNTLO00327 626 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ABLIM1O14639 778 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 SLC30A4O14863 429 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 VNN2O95498 520 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 PMLP29590 882 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 MAGEA9P43362 315 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ADCY1Q08828 1119 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms