RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 SKIDA1Q1XH10 827 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 PRAMEF18Q5VWM3 479 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 MON1BQ7L1V2 547 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 MYCBPAPQ8TBZ2 947 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 MSTO1Q9BUK6 570 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 HOMER3Q9NSC5 361 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 SSC5DA1L4H1 1573 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 TCRBV7S2A1N4TA0A589 114 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 VNN1O95497 513 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 TGFB3P10600 412 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 RRM1P23921 792 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ADCY2Q08462 1091 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 CALCOCO2Q13137 446 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 NEDD9Q14511 834 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 TARBP2Q15633 366 aaKnown RBP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 SGO2Q562F6 1265 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 LBX2Q6XYB7 198 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ARMC9Q7Z3E5 817 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 YTHDF3Q7Z739 585 aaKnown RBP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 GRK7Q8WTQ7 553 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ZNF473Q8WTR7 871 aaKnown RBP18.37■□□□□ 0.53
BRCA2-204ENST00000530893 GGA3Q9NZ52 723 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 WHRNQ9P202 907 aa18.37■□□□□ 0.53
BRCA2-204ENST00000530893 ZNF541Q9H0D2 1346 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 A0A0G2JMZ2 1700 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 EDNRBP24530 442 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 GRM1Q13255 1194 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 C6orf118Q5T5N4 469 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 ABRAQ8N0Z2 381 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 ZNF526Q8TF50 670 aaPredicted RBP18.36■□□□□ 0.53
BRCA2-204ENST00000530893 HAPLN2Q9GZV7 340 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 GPRC5DQ9NZD1 345 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 FZD1Q9UP38 647 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 SCINQ9Y6U3 715 aa18.36■□□□□ 0.53
BRCA2-204ENST00000530893 GMNCA6NCL1 334 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CLDN3O15551 220 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PSTPIP1O43586 416 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 TRAPPC3O43617 180 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PROSCO94903 275 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CLTAP09496 248 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 EFNA5P52803 228 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PPP1R7Q15435 360 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CPNE8Q86YQ8 564 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 TRPM4Q8TD43 1214 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CPA5Q8WXQ8 436 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CENPTQ96BT3 561 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 STMN4Q9H169 189 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 E7EVH7 732 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 ADCY3O60266 1144 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 FARP2O94887 1054 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 ITIH2P19823 946 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 UBA1P22314 1058 aaKnown RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 GNA15P30679 374 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 WNT7BP56706 349 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 SLC29A2Q14542 456 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 LMBRD2Q68DH5 695 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 TRMT10CQ7L0Y3 403 aaKnown RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 RNF25Q96BH1 459 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CYFIP2Q96F07 1278 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 RABEP2Q9H5N1 569 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PTPN22Q9Y2R2 807 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PCDHB4Q9Y5E5 795 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 PTPRJQ12913 1337 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 CNTNAP2Q9UHC6 1331 aa18.35■□□□□ 0.53
BRCA2-204ENST00000530893 GSTTP1A0A1W2PQM5 241 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 SORBS3O60504 671 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 MAFO75444 373 aaPredicted RBP18.34■□□□□ 0.53
BRCA2-204ENST00000530893 NOMO3P69849 1222 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 CAV1Q03135 178 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
BRCA2-204ENST00000530893 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 EXOC8Q8IYI6 725 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 IMPG2Q9BZV3 1241 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 PTPRFP10586 1907 aa18.34■□□□□ 0.53
BRCA2-204ENST00000530893 RIPK2O43353 540 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 GAS2O43903 313 aaKnown RBP18.33■□□□□ 0.53
BRCA2-204ENST00000530893 CAND2O75155 1236 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 KIAA0754O94854 1291 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 GAS8O95995 478 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 AGTP01019 485 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 STAT5BP51692 787 aa18.33■□□□□ 0.53
BRCA2-204ENST00000530893 NOP14P78316 857 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms