RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 IRF7Q92985 503 aa17.67■□□□□ 0.42
COL16A1-216ENST00000529928 CORO1BQ9BR76 489 aa17.67■□□□□ 0.42
COL16A1-216ENST00000529928 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
COL16A1-216ENST00000529928 CHRDQ9H2X0 955 aa17.67■□□□□ 0.42
COL16A1-216ENST00000529928 NDRG2Q9UN36 371 aaKnown RBP17.67■□□□□ 0.42
COL16A1-216ENST00000529928 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 I3L4J1 428 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 ATF2P15336 505 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 FCARP24071 287 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 RPA1P27694 616 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 BRCC3P46736 316 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 GRM2Q14416 872 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 ATF7IP2Q5U623 682 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 POTEHQ6S545 545 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 TCEAL8Q8IYN2 117 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 ZNF687Q8N1G0 1237 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 IFT74Q96LB3 600 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 GOLGA2P5Q9HBQ8 144 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 TRPV5Q9NQA5 729 aa17.66■□□□□ 0.42
COL16A1-216ENST00000529928 TOPORSQ9NS56 1045 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-216ENST00000529928 CACNA1BQ00975 2339 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 WDR27A2RRH5 827 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 YARSP54577 528 aaKnown RBP17.65■□□□□ 0.42
COL16A1-216ENST00000529928 TRIM29Q14134 588 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 FAM78AQ5JUQ0 283 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 LAIR1Q6GTX8 287 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 PDZD4Q76G19 769 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-216ENST00000529928 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 CELF5Q8N6W0 485 aaKnown RBP17.65■□□□□ 0.42
COL16A1-216ENST00000529928 ASB16Q96NS5 453 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 TMEM60Q9H2L4 133 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 SLC38A7Q9NVC3 462 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 INSL5Q9Y5Q6 135 aa17.65■□□□□ 0.42
COL16A1-216ENST00000529928 DCDC2BA2VCK2 349 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 H7C4K7 107 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 SYN3O14994 580 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 KRT37O76014 449 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 TDGF1P13385 188 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 PSMC3P17980 439 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 MCM7P33993 719 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 CCR3P51677 355 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 CYP4A22Q5TCH4 519 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 NT5DC1Q5TFE4 455 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 TPGS2Q68CL5 300 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 MAP4K3Q8IVH8 894 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 FAM3CQ92520 227 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 KIFAP3Q92845 792 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 TCEAL4Q96EI5 215 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 KIFC3Q9BVG8 833 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 CCDC94Q9BW85 323 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-216ENST00000529928 ZNF334Q9HCZ1 680 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-216ENST00000529928 PARD6AQ9NPB6 346 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 TNFSF13BQ9Y275 285 aa17.64■□□□□ 0.41
COL16A1-216ENST00000529928 K7ERI5 159 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 LRP3O75074 770 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 MUTP22033 750 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 GRM5P41594 1212 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 ARPP19P56211 112 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
COL16A1-216ENST00000529928 XKR4Q5GH76 650 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 IQCEQ6IPM2 695 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 DEPDC1BQ8WUY9 529 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 SMARCD2Q92925 531 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 GTF3C6Q969F1 213 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 PIAS3Q9Y6X2 628 aa17.63■□□□□ 0.41
COL16A1-216ENST00000529928 COL4A2P08572 1712 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 PODXLO00592 558 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 SEC24AO95486 1093 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 RETP07949 1114 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 GDI1P31150 447 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 CCR2P41597 374 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 SPEM2Q0P670 501 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 HAUS3Q68CZ6 603 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 VITQ6UXI7 678 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 ALKAL1Q6UXT8 129 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 LEMD2Q8NC56 503 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 NETO1Q8TDF5 533 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-216ENST00000529928 LMAN1LQ9HAT1 526 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 MAFFQ9ULX9 164 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 NUB1Q9Y5A7 615 aa17.62■□□□□ 0.41
COL16A1-216ENST00000529928 EPG5Q9HCE0 2579 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 ZNF263O14978 683 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 ADRB1P08588 477 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 RPL9P32969 192 aaKnown RBP17.61■□□□□ 0.41
COL16A1-216ENST00000529928 MLLT6P55198 1093 aaPredicted RBP17.61■□□□□ 0.41
COL16A1-216ENST00000529928 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
COL16A1-216ENST00000529928 MRPL58Q14197 206 aaKnown RBP17.61■□□□□ 0.41
COL16A1-216ENST00000529928 LPAL2Q16609 132 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 ZNF568Q3ZCX4 644 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 CTXN3Q4LDR2 81 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 ZNF280DQ6N043 979 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 PRR23BQ6ZRT6 265 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 CEP120Q8N960 986 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms