RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
COPB1-207ENST00000529866 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
COPB1-207ENST00000529866 PDZD7Q9H5P4 517 aa11.5□□□□□ -0.57
COPB1-207ENST00000529866 IGF2RP11717 2491 aa11.5□□□□□ -0.57
COPB1-207ENST00000529866 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 WDR81Q562E7 1941 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 MTCL1Q9Y4B5 1905 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 WDR27A2RRH5 827 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 SLITRK3O94933 977 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 CCNE1P24864 410 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 TKTP29401 623 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 RARRES1P49788 294 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 EVCP57679 992 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 NAB2Q15742 525 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 MAPK6Q16659 721 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 DCAF4L1Q3SXM0 396 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 HEATR6Q6AI08 1181 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 VITQ6UXI7 678 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 PIK3AP1Q6ZUJ8 805 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 FAM160A2Q8N612 972 aaPredicted RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 E2F7Q96AV8 911 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 TCEAL4Q96EI5 215 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 FZD8Q9H461 694 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 SLITRK6Q9H5Y7 841 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 CYP4F11Q9HBI6 524 aa11.49□□□□□ -0.57
COPB1-207ENST00000529866 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
COPB1-207ENST00000529866 PRKCBP05771 671 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 PROS1P07225 676 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 ATF2P15336 505 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 HOXA6P31267 233 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 CLCNKBP51801 687 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 KPNA1P52294 538 aaPredicted RBP11.48□□□□□ -0.57
COPB1-207ENST00000529866 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
COPB1-207ENST00000529866 GAS6Q14393 721 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 NOSTRINQ8IVI9 506 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 TCEAL8Q8IYN2 117 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 ZSCAN18Q8TBC5 510 aaPredicted RBP11.48□□□□□ -0.57
COPB1-207ENST00000529866 LOXL4Q96JB6 756 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 AIFM3Q96NN9 605 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 GPR88Q9GZN0 384 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 TRPV4Q9HBA0 871 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 ASAH2Q9NR71 780 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 INSL5Q9Y5Q6 135 aa11.48□□□□□ -0.57
COPB1-207ENST00000529866 DOCK6Q96HP0 2047 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 HEPACAM2A8MVW5 462 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 H7C4K7 107 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 K7ESF4 209 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 ACKR2O00590 384 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 SYN3O14994 580 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 CDKL5O76039 1030 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 ABLIM3O94929 683 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 VIPR2P41587 438 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 ARPP19P56211 112 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 UPP1Q16831 310 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 GLRA4Q5JXX5 417 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 TPGS2Q68CL5 300 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 MAEAQ7L5Y9 396 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 MFSD6LQ8IWD5 586 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 GPRC5CQ9NQ84 441 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 RALYQ9UKM9 306 aaKnown RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
COPB1-207ENST00000529866 TDRD15B5MCY1 1934 aaKnown RBP11.47□□□□□ -0.57
COPB1-207ENST00000529866 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 I3L4J1 428 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ARNTLO00327 626 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 CHADO15335 359 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 REC8O95072 547 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ZNF806P0C7X5 589 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 XRCC6P12956 609 aaKnown RBP eCLIP11.46□□□□□ -0.57
COPB1-207ENST00000529866 LIG1P18858 919 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ATP2B1P20020 1258 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 CCR2P41597 374 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 BRCC3P46736 316 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 YARSP54577 528 aaKnown RBP11.46□□□□□ -0.57
COPB1-207ENST00000529866 ACAP1Q15027 740 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 SF3A2Q15428 464 aaKnown RBP11.46□□□□□ -0.57
COPB1-207ENST00000529866 STPG1Q5TH74 334 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ZNF280DQ6N043 979 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 POTEHQ6S545 545 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms