RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PDCP20941 246 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 GUCY1A2P33402 732 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 WASP42768 502 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 SLC6A9P48067 706 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 TIGD2Q4W5G0 525 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 IFIT1BQ5T764 474 aaKnown RBP5.87□□□□□ -1.47
C11orf88-204ENST00000529661 SLC4A10Q6U841 1118 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 MRGPREQ86SM8 312 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 RHOT1Q8IXI2 618 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 PROKR1Q8TCW9 393 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 RAB24Q969Q5 203 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 SLC39A13Q96H72 371 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 MLST8Q9BVC4 326 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 MANSC1Q9H8J5 431 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 NMRK2Q9NPI5 230 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 AKIP1Q9NQ31 210 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 FZD1Q9UP38 647 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 CHST2Q9Y4C5 530 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
C11orf88-204ENST00000529661 ACTL7AQ9Y615 435 aa5.87□□□□□ -1.47
C11orf88-204ENST00000529661 PNPLA7Q6ZV29 1317 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 DRGXA6NNA5 263 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 RNASET2O00584 256 aaKnown RBP5.86□□□□□ -1.47
C11orf88-204ENST00000529661 CTNND1O60716 968 aaKnown RBP5.86□□□□□ -1.47
C11orf88-204ENST00000529661 PEX14O75381 377 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 OFD1O75665 1012 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 NDUFA10O95299 355 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ABHD16AO95870 558 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ITGB1P05556 798 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 SPATA31D3P0C874 917 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 TRIM27P14373 513 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
C11orf88-204ENST00000529661 PCSK1P29120 753 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 KIF23Q02241 960 aaPredicted RBP5.86□□□□□ -1.47
C11orf88-204ENST00000529661 GRM3Q14832 879 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ARHGAP29Q52LW3 1261 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 PDCD4Q53EL6 469 aaKnown RBP5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ZNF529Q6P280 563 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 KCNV1Q6PIU1 500 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 SPATA31D4Q6ZUB0 917 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 USP45Q70EL2 814 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 FBXO41Q8TF61 875 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 LENG9Q96B70 501 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 TIFAQ96CG3 184 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 CYFIP2Q96F07 1278 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 TAAR9Q96RI9 348 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 MYOCQ99972 504 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 ZNF700Q9H0M5 742 aa5.86□□□□□ -1.47
C11orf88-204ENST00000529661 MYBBP1AQ9BQG0 1328 aaKnown RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 TEX33O43247 280 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 EDNRBP24530 442 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 SLC16A1P53985 500 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 RHBDL3P58872 404 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 TGFB2P61812 414 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 PURAQ00577 322 aaKnown RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 LY6G5CQ5SRR4 150 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 FAM102AQ5T9C2 384 aaPredicted RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 MED25Q71SY5 747 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 CHST15Q7LFX5 561 aaPredicted RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 PLXDC1Q8IUK5 500 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 DRC7Q8IY82 874 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 ZGPATQ8N5A5 531 aaKnown RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 CASKIN2Q8WXE0 1202 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 NEU1Q99519 415 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 SARGQ9BW04 601 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 GTPBP4Q9BZE4 634 aaKnown RBP5.85□□□□□ -1.47
C11orf88-204ENST00000529661 MAN1C1Q9NR34 630 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 C1orf112Q9NSG2 853 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 LIMCH1Q9UPQ0 1083 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 IPPQ9Y573 584 aa5.85□□□□□ -1.47
C11orf88-204ENST00000529661 ARID4BQ4LE39 1312 aaPredicted RBP5.84□□□□□ -1.47
C11orf88-204ENST00000529661 PLIN1O60240 522 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 LPXNO60711 386 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 PPFIA4O75335 1185 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 POMCP01189 267 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 AMY1AP04745 511 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 DDCP20711 480 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 MTM1Q13496 603 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 ZNF267Q14586 743 aaPredicted RBP5.84□□□□□ -1.47
C11orf88-204ENST00000529661 PTPAQ15257 358 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 TSHZ3Q63HK5 1081 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 KSR2Q6VAB6 950 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 RHOUQ7L0Q8 258 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 UBE3BQ7Z3V4 1068 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 CATIPQ7Z7H3 387 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 RSPH3Q86UC2 560 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 FAM43AQ8N2R8 423 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 AMER2Q8N7J2 671 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 OR56A1Q8NGH5 318 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 PMM1Q92871 262 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 C1GALT1C1Q96EU7 318 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 DDX21Q9NR30 783 aaKnown RBP eCLIP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms