RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 PCBP1Q15365 356 aaKnown RBP eCLIP4.96□□□□□ -1.62
CASP4-207ENST00000529565 GRIK4Q16099 956 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 LY6KQ17RY6 165 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 CELF3Q5SZQ8 465 aaKnown RBP4.96□□□□□ -1.62
CASP4-207ENST00000529565 C6orf118Q5T5N4 469 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 BTBD8Q5XKL5 378 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 C4orf50Q6ZRC1 276 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 CEP57Q86XR8 500 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 MAP4K3Q8IVH8 894 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 REM2Q8IYK8 340 aaPredicted RBP4.96□□□□□ -1.62
CASP4-207ENST00000529565 ETNPPLQ8TBG4 499 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 ZNF384Q8TF68 577 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 C12orf42Q96LP6 360 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 RNPC3Q96LT9 517 aaKnown RBP4.96□□□□□ -1.62
CASP4-207ENST00000529565 CAPS2Q9BXY5 557 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 NOC2LQ9Y3T9 749 aaKnown RBP4.96□□□□□ -1.62
CASP4-207ENST00000529565 CRYBG1Q9Y4K1 1723 aa4.96□□□□□ -1.62
CASP4-207ENST00000529565 LRRC10BA6NIK2 292 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 F8W8V4 182 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ACKR2O00590 384 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 TADA2AO75478 443 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ATP1A1P05023 1023 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 UBA1P22314 1058 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 SERPINB6P35237 376 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CASP4P49662 377 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CLCN6P51797 869 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 IRX5P78411 483 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 PDE1BQ01064 536 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 IL9RQ01113 521 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CDR2Q01850 454 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 TMEM62Q0P6H9 643 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ASPHQ12797 758 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CCDC6Q16204 474 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ITPRIPL1Q6GPH6 555 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 RGMBQ6NW40 437 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 SH3BP5LQ7L8J4 393 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PLPPR4Q7Z2D5 763 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ANKRD23Q86SG2 305 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 VPS52Q8N1B4 723 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ANKRD42Q8N9B4 389 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PYROXD1Q8WU10 500 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 WNK4Q96J92 1243 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 DDX50Q9BQ39 737 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 TINF2Q9BSI4 451 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ASB7Q9H672 318 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 UBN1Q9NPG3 1134 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 BAZ2BQ9UIF8 2168 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 MID2Q9UJV3 735 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ZMYM2Q9UBW7 1377 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 RASGRF2O14827 1237 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 SRGAP2O75044 1071 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CABYRO75952 493 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 TAL1P17542 331 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 GNGT1P63211 74 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 EVX2Q03828 476 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 NR1H3Q13133 447 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CASP8Q14790 479 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 SNX17Q15036 470 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 EFHC1Q5JVL4 640 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ACAD10Q6JQN1 1059 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 RWDD4Q6NW29 188 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 MMS22LQ6ZRQ5 1243 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 NDUFAF2Q8N183 169 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ARHGAP24Q8N264 748 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 MICAL1Q8TDZ2 1067 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PPM1EQ8WY54 764 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 FAF2Q96CS3 445 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 WDR24Q96S15 920 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 EPAS1Q99814 870 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 HSD17B14Q9BPX1 270 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PORCNQ9H237 461 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 TAF1DQ9H5J8 278 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 ABCB6Q9NP58 842 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PFDN4Q9NQP4 134 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 COL16A1Q07092 1604 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 ZBBXA8MT70 800 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 HMGB1P1B2RPK0 211 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 POC1B-GALNT4F8VUJ3 575 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 NFKBIEO00221 500 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 NCK2O43639 380 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 MSCO60682 206 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 LSM8O95777 96 aaKnown RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 ITGB3P05106 788 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ZBTB48P10074 688 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 VDRP11473 427 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 PDGFRAP16234 1089 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 GNL1P36915 607 aaPredicted RBP4.95□□□□□ -1.62
CASP4-207ENST00000529565 THPOP40225 353 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 BBS9Q3SYG4 887 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 ANKRD20A3Q5VUR7 823 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CYP4F22Q6NT55 531 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 GPAT2Q6NUI2 795 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 CCDC62Q6P9F0 684 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 LBX2Q6XYB7 198 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 TLK2Q86UE8 772 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 VSIG1Q86XK7 387 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 SPATA4Q8NEY3 305 aa4.95□□□□□ -1.62
CASP4-207ENST00000529565 INPP4AQ96PE3 977 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms