RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 NELL2Q99435 816 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 HINFPQ9BQA5 517 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 PDZD7Q9H5P4 517 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 SPATA6Q9NWH7 488 aaPredicted RBP6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 HCFC1R1Q9NWW0 138 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 ORC3Q9UBD5 711 aaPredicted RBP6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 MTRRQ9UBK8 725 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 KCNH3Q9ULD8 1083 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 POLIQ9UNA4 740 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 MTMR6Q9Y217 621 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 USP20Q9Y2K6 914 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 PCDHGA4Q9Y5G9 962 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 CACNA1AO00555 2505 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF292O60281 2723 aa6.83□□□□□ -1.32
CHRNA6-202ENST00000529467 F5P12259 2224 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 GPR179Q6PRD1 2367 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 BTBD18B2RXH4 712 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 H3BQV1 296 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 TMEM189-UBE2V1I3L0A0 370 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ACKR2O00590 384 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 N4BP3O15049 544 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 SPTLC1O15269 473 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 USO1O60763 962 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ECI2O75521 394 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 RECQL4O94761 1208 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 TGM1P22735 817 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 KRT2P35908 639 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ATXN1P54253 815 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 KRT85P78386 507 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PFKPQ01813 784 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PRPF4BQ13523 1007 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PABPC1LQ4VXU2 614 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ZBTB41Q5SVQ8 909 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 EEF1DP3Q658K8 133 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 CATSPER3Q86XQ3 398 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ZBTB8OSQ8IWT0 167 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 NPAS3Q8IXF0 933 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 MCPH1Q8NEM0 835 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ATRIPQ8WXE1 791 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 SYAP1Q96A49 352 aaPredicted RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 MCRS1Q96EZ8 462 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PPP1R10Q96QC0 940 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 KXD1Q9BQD3 176 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 CCDC113Q9H0I3 377 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 TMEM60Q9H2L4 133 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 RTN4Q9NQC3 1192 aaKnown RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 AVENQ9NQS1 362 aaPredicted RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 PCDHGA2Q9Y5H1 932 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 BACE2Q9Y5Z0 518 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 MORC2Q9Y6X9 1032 aaPredicted RBP6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 CEP250Q9BV73 2442 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 DMXL1Q9Y485 3027 aa6.82□□□□□ -1.32
CHRNA6-202ENST00000529467 RALGAPA1Q6GYQ0 2036 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 NCAM2O15394 837 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TBC1D4O60343 1298 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 MED24O75448 989 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 B3GAT3O94766 335 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ABLIM3O94929 683 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 LETM1O95202 739 aaPredicted RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 PRKCBP05771 671 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 RHOP08100 348 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 PTPN2P17706 415 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 CYP11B2P19099 503 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TKTP29401 623 aaKnown RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 RPS9P46781 194 aaKnown RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 CLCNKBP51801 687 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 MAPK6Q16659 721 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 UPP1Q16831 310 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 SLC5A9Q2M3M2 681 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TANGO2Q6ICL3 276 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TSSK4Q6SA08 328 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 PADI6Q6TGC4 694 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ALKAL1Q6UXT8 129 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF852Q6ZMS4 543 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TPRG1Q6ZUI0 275 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 HS6ST3Q8IZP7 471 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 GPR161Q8N6U8 529 aaKnown RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 NECAB1Q8N987 351 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 FBXO18Q8NFZ0 1043 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF461Q8TAF7 563 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 TMC2Q8TDI7 906 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ING5Q8WYH8 240 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ELSPBP1Q96BH3 223 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 DDX27Q96GQ7 796 aaKnown RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 CCDC43Q96MW1 224 aaKnown RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ZNF396Q96N95 335 aaPredicted RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 ADPGKQ9BRR6 497 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 C2orf40Q9H1Z8 148 aa6.81□□□□□ -1.32
CHRNA6-202ENST00000529467 EPC1Q9H2F5 836 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms