RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 SOX4Q06945 474 aaPredicted RBP15.04■□□□□ -0
BEST1-206ENST00000529265 BIRC3Q13489 604 aa15.04■□□□□ -0
BEST1-206ENST00000529265 ZBTB6Q15916 424 aa15.04■□□□□ -0
BEST1-206ENST00000529265 LRIT3Q3SXY7 679 aa15.04■□□□□ -0
BEST1-206ENST00000529265 DHX40Q8IX18 779 aaKnown RBP15.04■□□□□ -0
BEST1-206ENST00000529265 COLGALT2Q8IYK4 626 aa15.04■□□□□ -0
BEST1-206ENST00000529265 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
BEST1-206ENST00000529265 PLEKHO2Q8TD55 490 aa15.04■□□□□ -0
BEST1-206ENST00000529265 BORCS6Q96GS4 357 aa15.04■□□□□ -0
BEST1-206ENST00000529265 UROC1Q96N76 676 aa15.04■□□□□ -0
BEST1-206ENST00000529265 ZNF558Q96NG5 402 aa15.04■□□□□ -0
BEST1-206ENST00000529265 TMEM175Q9BSA9 504 aa15.04■□□□□ -0
BEST1-206ENST00000529265 SLC28A3Q9HAS3 691 aa15.04■□□□□ -0
BEST1-206ENST00000529265 CACNG4Q9UBN1 327 aa15.04■□□□□ -0
BEST1-206ENST00000529265 PRG3Q9Y2Y8 225 aaPredicted RBP15.04■□□□□ -0
BEST1-206ENST00000529265 RWDD3Q9Y3V2 267 aa15.04■□□□□ -0
BEST1-206ENST00000529265 PCDHB12Q9Y5F1 795 aa15.04■□□□□ -0
BEST1-206ENST00000529265 SCN1AP35498 2009 aa15.04■□□□□ -0
BEST1-206ENST00000529265 KCNJ18B7U540 433 aa15.03■□□□□ -0
BEST1-206ENST00000529265 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
BEST1-206ENST00000529265 CLSTN1O94985 981 aa15.03■□□□□ -0
BEST1-206ENST00000529265 DNAJB2P25686 324 aa15.03■□□□□ -0
BEST1-206ENST00000529265 PBX3P40426 434 aa15.03■□□□□ -0
BEST1-206ENST00000529265 CLCNKBP51801 687 aa15.03■□□□□ -0
BEST1-206ENST00000529265 AP3M2P53677 418 aa15.03■□□□□ -0
BEST1-206ENST00000529265 ENPEPQ07075 957 aa15.03■□□□□ -0
BEST1-206ENST00000529265 DSC1Q08554 894 aa15.03■□□□□ -0
BEST1-206ENST00000529265 KCNJ12Q14500 433 aa15.03■□□□□ -0
BEST1-206ENST00000529265 NAB2Q15742 525 aa15.03■□□□□ -0
BEST1-206ENST00000529265 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
BEST1-206ENST00000529265 KCNT2Q6UVM3 1135 aa15.03■□□□□ -0
BEST1-206ENST00000529265 COLGALT1Q8NBJ5 622 aa15.03■□□□□ -0
BEST1-206ENST00000529265 ANKRD20A12PQ8NF67 263 aa15.03■□□□□ -0
BEST1-206ENST00000529265 OR5B17Q8NGF7 314 aa15.03■□□□□ -0
BEST1-206ENST00000529265 RABGGTAQ92696 567 aa15.03■□□□□ -0
BEST1-206ENST00000529265 TIFAQ96CG3 184 aa15.03■□□□□ -0
BEST1-206ENST00000529265 DDX27Q96GQ7 796 aaKnown RBP15.03■□□□□ -0
BEST1-206ENST00000529265 FAM84AQ96KN4 292 aa15.03■□□□□ -0
BEST1-206ENST00000529265 COLEC11Q9BWP8 271 aa15.03■□□□□ -0
BEST1-206ENST00000529265 MTUS1Q9ULD2 1270 aa15.03■□□□□ -0
BEST1-206ENST00000529265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.03■□□□□ -0
BEST1-206ENST00000529265 RANBP2P49792 3224 aaKnown RBP15.03■□□□□ -0
BEST1-206ENST00000529265 PTPRJQ12913 1337 aa15.02■□□□□ -0
BEST1-206ENST00000529265 CARNS1A5YM72 827 aa15.02■□□□□ -0
BEST1-206ENST00000529265 PODXLO00592 558 aa15.02■□□□□ -0
BEST1-206ENST00000529265 NRP1O14786 923 aa15.02■□□□□ -0
BEST1-206ENST00000529265 B4GALT3O60512 393 aa15.02■□□□□ -0
BEST1-206ENST00000529265 ITGB3P05106 788 aa15.02■□□□□ -0
BEST1-206ENST00000529265 GALTP07902 379 aa15.02■□□□□ -0
BEST1-206ENST00000529265 TPM2P07951 284 aa15.02■□□□□ -0
BEST1-206ENST00000529265 PRKCSHP14314 528 aaPredicted RBP15.02■□□□□ -0
BEST1-206ENST00000529265 RPL9P32969 192 aaKnown RBP15.02■□□□□ -0
BEST1-206ENST00000529265 CTNNB1P35222 781 aa15.02■□□□□ -0
BEST1-206ENST00000529265 GCLMP48507 274 aa15.02■□□□□ -0
BEST1-206ENST00000529265 SLC11A1P49279 550 aa15.02■□□□□ -0
BEST1-206ENST00000529265 MARSP56192 900 aaKnown RBP15.02■□□□□ -0
BEST1-206ENST00000529265 TRPC3Q13507 836 aa15.02■□□□□ -0
BEST1-206ENST00000529265 NCAPHQ15003 741 aa15.02■□□□□ -0
BEST1-206ENST00000529265 IQCB1Q15051 598 aa15.02■□□□□ -0
BEST1-206ENST00000529265 LUZP1Q86V48 1076 aa15.02■□□□□ -0
BEST1-206ENST00000529265 IRF2BP1Q8IU81 584 aa15.02■□□□□ -0
BEST1-206ENST00000529265 ZNF516Q92618 1163 aa15.02■□□□□ -0
BEST1-206ENST00000529265 CLP1Q92989 425 aaKnown RBP15.02■□□□□ -0
BEST1-206ENST00000529265 TGS1Q96RS0 853 aaKnown RBP15.02■□□□□ -0
BEST1-206ENST00000529265 ITGA11Q9UKX5 1188 aa15.02■□□□□ -0
BEST1-206ENST00000529265 PES1O00541 588 aaKnown RBP15.01□□□□□ -0.01
BEST1-206ENST00000529265 TADA2AO75478 443 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 B3GAT3O94766 335 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 EEF1GP26641 437 aaKnown RBP15.01□□□□□ -0.01
BEST1-206ENST00000529265 LRPAP1P30533 357 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 GTF2H1P32780 548 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 CLDN10P78369 228 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 RBP5P82980 135 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 TAP1Q03518 808 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 TCP11X2Q5H9J9 407 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 DCLRE1AQ6PJP8 1040 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 TRAPPC11Q7Z392 1133 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 TRIM59Q8IWR1 403 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 TMEM130Q8N3G9 435 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 C1orf127Q8N9H9 656 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 SLC35C1Q96A29 364 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 SAMD11Q96NU1 681 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 PAAF1Q9BRP4 392 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 C17orf80Q9BSJ5 609 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 CERS4Q9HA82 394 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 SPG21Q9NZD8 308 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 AGAP1Q9UPQ3 857 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
BEST1-206ENST00000529265 ARHGEF15O94989 841 aa15□□□□□ -0.01
BEST1-206ENST00000529265 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
BEST1-206ENST00000529265 PPM1AP35813 382 aa15□□□□□ -0.01
BEST1-206ENST00000529265 BMPR1AP36894 532 aa15□□□□□ -0.01
BEST1-206ENST00000529265 MXI1P50539 228 aa15□□□□□ -0.01
BEST1-206ENST00000529265 PPP3CAQ08209 521 aa15□□□□□ -0.01
BEST1-206ENST00000529265 KCNH2Q12809 1159 aa15□□□□□ -0.01
BEST1-206ENST00000529265 UPP1Q16831 310 aa15□□□□□ -0.01
BEST1-206ENST00000529265 C1orf220Q5T0J3 134 aa15□□□□□ -0.01
BEST1-206ENST00000529265 CDKAL1Q5VV42 579 aa15□□□□□ -0.01
BEST1-206ENST00000529265 C9orf57Q5W0N0 161 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms