RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PCDHB2Q9Y5E7 798 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 IRAK3Q9Y616 596 aa7.82□□□□□ -1.16
ITGB1-218ENST00000528877 A0A1B0GUA9 196 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 MEIS3P2A8K0S8 358 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 LINC01565O15544 149 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 B4GALT3O60512 393 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 SIN3BO75182 1162 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 OFD1O75665 1012 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 EFEMP2O95967 443 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 IL9P15248 144 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 EPB42P16452 691 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 CYP11B2P19099 503 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.161e-12■■■■■ 49.4
ITGB1-218ENST00000528877 NAMPTP43490 491 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 NRIP1P48552 1158 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ALDH7A1P49419 539 aaKnown RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 BCAR1P56945 870 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ERVFC1P60507 584 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ATP2C1P98194 919 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 TYRO3Q06418 890 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 DLX2Q07687 328 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 DSC1Q08554 894 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 CUL4AQ13619 759 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ZNF174Q15697 407 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 HYIQ5T013 277 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 SPOUT1Q5T280 376 aaKnown RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 SLC27A1Q6PCB7 646 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ADHFE1Q8IWW8 467 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 RNF169Q8NCN4 708 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 SMG8Q8ND04 991 aaKnown RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 VN1R2Q8NFZ6 395 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 URGCPQ8TCY9 931 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 LPPQ93052 612 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 POP1Q99575 1024 aaKnown RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 CCDC113Q9H0I3 377 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ZBP1Q9H171 429 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 C2orf40Q9H1Z8 148 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 FZD8Q9H461 694 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 RSAD1Q9HA92 442 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 PRMT7Q9NVM4 692 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 KANSL3Q9P2N6 904 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 LRWD1Q9UFC0 647 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 PUF60Q9UHX1 559 aaKnown RBP7.81□□□□□ -1.16
ITGB1-218ENST00000528877 PCDHB6Q9Y5E3 794 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 PCDHGC5Q9Y5F6 944 aa7.81□□□□□ -1.16
ITGB1-218ENST00000528877 ARHGEF35A5YM69 484 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 INO80B-WBP1J3KQ70 363 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 MBTPS2O43462 519 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 SLC26A4O43511 780 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ZC3H11AO75152 810 aaKnown RBP eCLIP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 SRGAP2BP0DMP2 458 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ARF4P18085 180 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ATP2B1P20020 1258 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 IBSPP21815 317 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 GJB2P29033 226 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 PBX3P40426 434 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 NDUFV1P49821 464 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 KRT17Q04695 432 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 NCBP1Q09161 790 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 GIT2Q14161 759 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 SMC1AQ14683 1233 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 PPP2R5AQ15172 486 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ARL6IP4Q66PJ3 421 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 BRAPQ7Z569 592 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 BTLAQ7Z6A9 289 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 DDX53Q86TM3 631 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TMEM173Q86WV6 379 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 RNF168Q8IYW5 571 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 MRPL43Q8N983 215 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 SNX29Q8TEQ0 813 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 BCL7CQ8WUZ0 217 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 SUSD6Q92537 303 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 KIFAP3Q92845 792 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 KCNN1Q92952 543 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 MYO19Q96H55 970 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TMEM169Q96HH4 297 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 IGSF21Q96ID5 467 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 HSH2DQ96JZ2 352 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TCF25Q9BQ70 676 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TMEM175Q9BSA9 504 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 MMTAG2Q9BU76 263 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TIPINQ9BVW5 301 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 C1QTNF1Q9BXJ1 281 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 NXF3Q9H4D5 531 aaKnown RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 NRDE2Q9H7Z3 1164 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 TLE6Q9H808 572 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 GPRC5CQ9NQ84 441 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ENTPD7Q9NQZ7 604 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 CD207Q9UJ71 328 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 IPPQ9Y573 584 aa7.8□□□□□ -1.16
ITGB1-218ENST00000528877 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-218ENST00000528877 PHLPP2Q6ZVD8 1323 aa7.79□□□□□ -1.16
ITGB1-218ENST00000528877 TCF20Q9UGU0 1960 aaKnown RBP7.79□□□□□ -1.16
ITGB1-218ENST00000528877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-218ENST00000528877 C2orf71A6NGG8 1288 aa7.79□□□□□ -1.16
ITGB1-218ENST00000528877 ARL5CA6NH57 179 aa7.79□□□□□ -1.16
ITGB1-218ENST00000528877 LRRIQ4A6NIV6 560 aa7.79□□□□□ -1.16
ITGB1-218ENST00000528877 HIDE1A8MVS5 230 aa7.79□□□□□ -1.16
ITGB1-218ENST00000528877 SHISA8B8ZZ34 492 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms