RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 PPP1R13LQ8WUF5 828 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 LINC01599Q8WXQ3 324 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 KHSRPQ92945 711 aaKnown RBP eCLIP6.72□□□□□ -1.33
MACF1-228ENST00000528611 CLP1Q92989 425 aaKnown RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 ZNF668Q96K58 619 aaPredicted RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 ZNF560Q96MR9 790 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 PPP1R10Q96QC0 940 aaKnown RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 ERGIC2Q96RQ1 377 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 PPP1R16BQ96T49 567 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.72□□□□□ -1.33
MACF1-228ENST00000528611 NUP58Q9BVL2 599 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 EIF2AQ9BY44 585 aaKnown RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 IMPG2Q9BZV3 1241 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 GZF1Q9H116 711 aaPredicted RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 HSD3B7Q9H2F3 369 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 NDST4Q9H3R1 872 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 NXF3Q9H4D5 531 aaKnown RBP6.72□□□□□ -1.33
MACF1-228ENST00000528611 PCIF1Q9H4Z3 704 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 SSX2IPQ9Y2D8 614 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 RALGAPA2Q2PPJ7 1873 aa6.72□□□□□ -1.33
MACF1-228ENST00000528611 TET1Q8NFU7 2136 aa6.71□□□□□ -1.33
MACF1-228ENST00000528611 LACTBL1A8MY62 500 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 C5orf67F2Z3F1 127 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 PIRO00625 290 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 C4BPAP04003 597 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 TMEM191BP0C7N4 346 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 CXCL8P10145 99 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 ATP2A2P16615 1042 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 LAG3P18627 525 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 TRIM21P19474 475 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 TBXAS1P24557 533 aaPredicted RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 MAGEA10P43363 369 aaPredicted RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 FMO5P49326 533 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 CASP4P49662 377 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 MRE11P49959 708 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 MXI1P50539 228 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 STX17P56962 302 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 YWHAEP62258 255 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 UBE3AQ05086 875 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 KCNH2Q12809 1159 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 TRIM14Q14142 442 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 NR1I3Q14994 352 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 NAB2Q15742 525 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 RAB30Q15771 203 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 PDE12Q6L8Q7 609 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 GBP6Q6ZN66 633 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 TRAPPC11Q7Z392 1133 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 LUZP1Q86V48 1076 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 HERC6Q8IVU3 1022 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 TDHQ8IZJ6 230 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 FBXL13Q8NEE6 735 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 SAAL1Q96ER3 474 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 CASD1Q96PB1 797 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 FAM193BQ96PV7 902 aaPredicted RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 GAD1Q99259 594 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 COLEC11Q9BWP8 271 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 PRO3102Q9H379 93 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 PLCB1Q9NQ66 1216 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 SAMSN1Q9NSI8 373 aaKnown RBP6.71□□□□□ -1.34
MACF1-228ENST00000528611 RAB20Q9NX57 234 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 GDAP2Q9NXN4 497 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 DPP3Q9NY33 737 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 DSEQ9UL01 958 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 MYO6Q9UM54 1294 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 LZTS1Q9Y250 596 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 PCDHA11Q9Y5I1 949 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
MACF1-228ENST00000528611 FSD2A1L4K1 749 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 GOLGA6L3A6NEY3 463 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 LRRIQ3A6PVS8 624 aaPredicted RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 LGALS16A8MUM7 142 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 TISP43B9A030 160 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 PTGESO14684 152 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 SYN3O14994 580 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 KIF4AO95239 1232 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 SERPINC1P01008 464 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 CCDC172P0C7W6 258 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 AKAP5P24588 427 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 MLH1P40692 756 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 TNFSF9P41273 254 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 ALDH7A1P49419 539 aaKnown RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.34
MACF1-228ENST00000528611 COPB1P53618 953 aaKnown RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 UBASH3AP57075 661 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 PLCB3Q01970 1234 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 GCNT1Q02742 428 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 RNASELQ05823 741 aaKnown RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 SMARCB1Q12824 385 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 TRPC3Q13507 836 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
MACF1-228ENST00000528611 KRT31Q15323 416 aa6.7□□□□□ -1.34
MACF1-228ENST00000528611 UPP1Q16831 310 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms