RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 SLC22A17Q8WUG5 538 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
CMTM1-210ENST00000528441 ACCSQ96QU6 501 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 PANK4Q9NVE7 773 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
CMTM1-210ENST00000528441 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 C2CD4DB7Z1M9 353 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 PI4K2BG5E9Z4 385 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 H7C4K7 107 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 PRRG1O14668 218 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 OGTO15294 1046 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 TGM5O43548 720 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 PPP6R2O75170 966 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 RFPL2O75678 378 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 CPB1P15086 417 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 TNFSF9P41273 254 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 NASPP49321 788 aaPredicted RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 MCL1Q07820 350 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 ZC2HC1CQ53FD0 456 aaPredicted RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 SLFN12LQ6IEE8 588 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 ANKS3Q6ZW76 656 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 OTOP3Q7RTS5 596 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 CEP57L1Q8IYX8 460 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 IQUBQ8NA54 791 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 LINC00301Q8NCQ3 95 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 SUSD6Q92537 303 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 C18orf25Q96B23 403 aaPredicted RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 NTPCRQ9BSD7 190 aaKnown RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 S1PR5Q9H228 398 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 PLEKHA4Q9H4M7 779 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 SEL1LQ9UBV2 794 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 TUBGCP4Q9UGJ1 667 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 UBQLN1Q9UMX0 589 aaKnown RBP9.88□□□□□ -0.83
CMTM1-210ENST00000528441 CDY1Q9Y6F8 540 aa9.88□□□□□ -0.83
CMTM1-210ENST00000528441 REV3LO60673 3130 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 MYMKA6NI61 221 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 CCL16O15467 120 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 XYLBO75191 536 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 LRG1P02750 347 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 C8AP07357 584 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 PROZP22891 400 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 RPL9P32969 192 aaKnown RBP9.87□□□□□ -0.83
CMTM1-210ENST00000528441 OR1D2P34982 312 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 ACOT2P49753 483 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 KRT85P78386 507 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 DNM1Q05193 864 aaKnown RBP9.87□□□□□ -0.83
CMTM1-210ENST00000528441 KCNC3Q14003 757 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 TMEM132DQ14C87 1099 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 POSTNQ15063 836 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 UPP1Q16831 310 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 CTXN3Q4LDR2 81 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 ZNF280DQ6N043 979 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 ARMCX5Q6P1M9 558 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 GPR149Q86SP6 731 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 MAP4K3Q8IVH8 894 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 APPL2Q8NEU8 664 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 PIK3R5Q8WYR1 880 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 HVCN1Q96D96 273 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 TNMDQ9H2S6 317 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 MFSD1Q9H3U5 465 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 RXFP1Q9HBX9 757 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 CHST7Q9NS84 486 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
CMTM1-210ENST00000528441 ATP6V1DQ9Y5K8 247 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 TTC28Q96AY4 2481 aa9.87□□□□□ -0.83
CMTM1-210ENST00000528441 VCANP13611 3396 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 CLUHO75153 1309 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 A0A0C4DFX4 3053 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 LACTBL1A8MY62 500 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 LOC730098B7Z3J9 87 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 TMEM189-UBE2V1I3L0A0 370 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 POLR2DO15514 142 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 PRPF6O94906 941 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 BRD1O95696 1058 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 KCNE1P15382 129 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 AFMP43652 599 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 GUCY2FP51841 1108 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 ZNF131P52739 623 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 GTF2BQ00403 316 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 SOX4Q06945 474 aaPredicted RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 ALCAMQ13740 583 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 SLC10A6Q3KNW5 377 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 L1TD1Q5T7N2 865 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 C15orf39Q6ZRI6 1047 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 CD302Q8IX05 232 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 ELMOD1Q8N336 334 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 LNX1Q8TBB1 728 aaPredicted RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 SLC7A14Q8TBB6 771 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms