RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ADAM12O43184 909 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 TRAK2O60296 914 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 TBC1D4O60343 1298 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 SRFP11831 508 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
CAPN1-212ENST00000527887 PLCG1P19174 1290 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 CYP3A5P20815 502 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 ELF1P32519 619 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
CAPN1-212ENST00000527887 BRCC3P46736 316 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 LIG4P49917 911 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 VARS2Q5ST30 1063 aaKnown RBP15.48■□□□□ 0.07
CAPN1-212ENST00000527887 GET4Q7L5D6 327 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-212ENST00000527887 CD302Q8IX05 232 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 MYCT1Q8N699 235 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 SLC7A14Q8TBB6 771 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 SUSD3Q96L08 255 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 REEP2Q9BRK0 252 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 SMOC2Q9H3U7 446 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 CCDC39Q9UFE4 941 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 TBX20Q9UMR3 447 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-212ENST00000527887 DENND4AQ7Z401 1863 aa15.48■□□□□ 0.07
CAPN1-212ENST00000527887 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 ABLIM3O94929 683 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 KRT18P05783 430 aaKnown RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 ADRB2P07550 413 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 ATF2P15336 505 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 AOC1P19801 751 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 LRPAP1P30533 357 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 TPGS2Q68CL5 300 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 MTSS1LQ765P7 747 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 LARP4BQ92615 738 aaKnown RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 ST6GALNAC4Q9H4F1 302 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 AVENQ9NQS1 362 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
CAPN1-212ENST00000527887 UBQLN1Q9UMX0 589 aaKnown RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 SRPRBQ9Y5M8 271 aaKnown RBP15.47■□□□□ 0.07
CAPN1-212ENST00000527887 A0A0B4J269 797 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 ARHGEF37A1IGU5 675 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 OGTO15294 1046 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 TBCAO75347 108 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 IGFBP6P24592 240 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 MARCKSP29966 332 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 TXLNAP40222 546 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 GTF2BQ00403 316 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 POU5F1Q01860 360 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 PPP2R3AQ06190 1150 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 HTR4Q13639 388 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 DHX8Q14562 1220 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 MCM6Q14566 821 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 KARSQ15046 597 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 ZBTB6Q15916 424 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 TCEAL8Q8IYN2 117 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 TMEM105Q8N8V8 129 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 KRI1Q8N9T8 703 aaKnown RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 FLCNQ8NFG4 579 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-212ENST00000527887 SLC2A4RGQ9NR83 387 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
CAPN1-212ENST00000527887 CACNA1HO95180 2353 aa15.46■□□□□ 0.06
CAPN1-212ENST00000527887 MYO10Q9HD67 2058 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 I3L4J1 428 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 K7ENM7 598 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 CCL16O15467 120 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 MEFVO15553 781 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-212ENST00000527887 MICAL2O94851 1124 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 CXCL8P10145 99 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 NPR3P17342 541 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 SYT1P21579 422 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 MCM4P33991 863 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 ROR1Q01973 937 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 GRIN1Q05586 938 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 PTPAQ15257 358 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 PABPC1LQ4VXU2 614 aaKnown RBP15.45■□□□□ 0.06
CAPN1-212ENST00000527887 SLFN12LQ6IEE8 588 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 ZNF280DQ6N043 979 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 PHLDB3Q6NSJ2 640 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 MAP4K3Q8IVH8 894 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 HSCBQ8IWL3 235 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 SIX5Q8N196 739 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 DDX12PQ92771 950 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 ATOH1Q92858 354 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-212ENST00000527887 FGF13Q92913 245 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 HAPLN2Q9GZV7 340 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 RPF1Q9H9Y2 349 aaKnown RBP15.45■□□□□ 0.06
CAPN1-212ENST00000527887 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 SEL1LQ9UBV2 794 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 NUMBLQ9Y6R0 609 aa15.45■□□□□ 0.06
CAPN1-212ENST00000527887 PLXNA3P51805 1871 aa15.44■□□□□ 0.06
CAPN1-212ENST00000527887 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms