RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	GBP7	Q8N8V2	638 aa	Predicted RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATP11C	Q8NB49	1132 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC150	Q8NCX0	1101 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GIMAP1	Q8WWP7	306 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ASB15	Q8WXK1	588 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LZIC	Q8WZA0	190 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RTF1	Q92541	710 aa	Known RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TAF4B	Q92750	862 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLC35B4	Q969S0	331 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NACC2	Q96BF6	587 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RSRC1	Q96IZ7	334 aa	Known RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RPL10L	Q96L21	214 aa	Known RBP	4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC114	Q96M63	670 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCSER2	Q9H7U1	834 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CAPN10	Q9HC96	672 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SMURF1	Q9HCE7	757 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EXOC1	Q9NV70	894 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EXOC6B	Q9Y2D4	811 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ASB1	Q9Y576	335 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PCDHA8	Q9Y5H6	950 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	COX11	Q9Y6N1	276 aa		4.13	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SOGA1	O94964	1423 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ATP10A	O60312	1499 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PRDM15	P57071	1507 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CLASP1	Q7Z460	1538 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ERICH2	A1L162	156 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	UBE2QL1	A1L167	161 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SYCE3	A1L190	88 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CFAP69	A5D8W1	941 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GOLGA6L9	A6NEM1	432 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMEM221	A6NGB7	291 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARVCF	O00192	962 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KCNK3	O14649	394 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	H2AFY	O75367	372 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BBOX1	O75936	387 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	VIL1	P09327	827 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CDK4	P11802	303 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	APEX1	P27695	318 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CLK3	P49761	638 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PSMD7	P51665	324 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	LACTB	P83111	547 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ADCY1	Q08828	1119 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MAP3K12	Q12852	859 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EIF2B5	Q13144	721 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLMAP	Q14BN4	828 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299		Q4G0T1	1027 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC38	Q502W7	563 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PARP10	Q53GL7	1025 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ARMC3	Q5W041	872 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SLC30A9	Q6PML9	568 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CWC27	Q6UX04	472 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PACS1	Q6VY07	963 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMEM110	Q86TL2	294 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MTDH	Q86UE4	582 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TTC30A	Q86WT1	665 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	VPS37D	Q86XT2	251 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SPATS2	Q86XZ4	545 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RNF168	Q8IYW5	571 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MYO1H	Q8N1T3	1032 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ANKRD53	Q8N9V6	530 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	VPS37A	Q8NEZ2	397 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GFM2	Q969S9	779 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CCDC47	Q96A33	483 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	HOOK2	Q96ED9	719 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RBM41	Q96IZ5	413 aa	Known RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMX3	Q96JJ7	454 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TCF25	Q9BQ70	676 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	SEZ6L	Q9BYH1	1024 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TRIM4	Q9C037	500 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	BRD8	Q9H0E9	1235 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZNF408	Q9H9D4	720 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TMEM165	Q9HC07	324 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	TUBA8	Q9NY65	449 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZNF510	Q9Y2H8	683 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	1e-9	■■□□□ 13.2
CLNS1A-209	ENST00000527299	N6AMT1	Q9Y5N5	214 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	GMEB1	Q9Y692	573 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299		E9PCH4	1651 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	UACA	Q9BZF9	1416 aa		4.12	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PRAMEF22	A3QJZ6	481 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	KIAA0355	O15063	1070 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PLIN1	O60240	522 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	CEP104	O60308	925 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	NEMF	O60524	1076 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PEX14	O75381	377 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZNF189	O75820	626 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RNF8	O76064	485 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FSBP	O95073	299 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	MAP4K4	O95819	1239 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	IDO1	P14902	403 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	EZR	P15311	586 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	ZFX	P17010	805 aa	Predicted RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	RPL17	P18621	184 aa	Known RBP	4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	FNTA	P49354	379 aa		4.11	□□□□□ -1.75
CLNS1A-209	ENST00000527299	PAPOLA	P51003	745 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms