RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 KRT18P05783 430 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 CLTAP09496 248 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 GUCY2FP51841 1108 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 GTF2BQ00403 316 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 MRPL58Q14197 206 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 PDCD11Q14690 1871 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 UBALD2Q8IYN6 164 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 RASSF8Q8NHQ8 419 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 DNAJC19Q96DA6 116 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 BICD1Q96G01 975 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 PANK2Q9BZ23 570 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 ZHX3Q9H4I2 956 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 MORC2Q9Y6X9 1032 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-204ENST00000527253 NOTCH4Q99466 2003 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 PPEF2O14830 753 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 CCL16O15467 120 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 NARSO43776 548 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 C8AP07357 584 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ADRB2P07550 413 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 GBP2P32456 591 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 NASPP49321 788 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 LIG4P49917 911 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 VARS2Q5ST30 1063 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 RRAGBQ5VZM2 374 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ELMSAN1Q6PJG2 1045 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 POTEHQ6S545 545 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ZNF720Q7Z2F6 126 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 GRASPQ7Z6J2 395 aaPredicted RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 SFR1Q86XK3 245 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 MAP4K3Q8IVH8 894 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 STRA6Q9BX79 667 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 ST6GALNAC4Q9H4F1 302 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 PIDD1Q9HB75 910 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 EPS15L1Q9UBC2 864 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 STK17AQ9UEE5 414 aa11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 CPSF3Q9UKF6 684 aaKnown RBP11.38□□□□□ -0.59
PRPF40B-204ENST00000527253 HNRNPDLO14979 420 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 OGTO15294 1046 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 TRAPPC3O43617 180 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 TBCAO75347 108 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 PPP1R37O75864 691 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 ABLIM3O94929 683 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 HNRNPA1P09651 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 LAMP2P13473 410 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 AVPR2P30518 371 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 LRPAP1P30533 357 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 ROR1Q01973 937 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 KCNA1Q09470 495 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 TDGQ13569 410 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 SLC8B1Q6J4K2 584 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 SLC44A3Q8N4M1 653 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 SLC7A14Q8TBB6 771 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 DDX12PQ92771 950 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 MSTO1Q9BUK6 570 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 RPP25Q9BUL9 199 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 FGFBP2Q9BYJ0 223 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 ZSCAN16Q9H4T2 348 aaPredicted RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 DNMT3BQ9UBC3 853 aaKnown RBP11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 FBXL5Q9UKA1 691 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 STYXL1Q9Y6J8 313 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 KMT2EQ8IZD2 1858 aa11.37□□□□□ -0.59
PRPF40B-204ENST00000527253 WDR27A2RRH5 827 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 ANHXE9PGG2 379 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 SYN3O14994 580 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 SEC24AO95486 1093 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 NPR3P17342 541 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 SCP2P22307 547 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 FSHRP23945 695 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 ADSSP30520 456 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 HOXA9P31269 272 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 MCM4P33991 863 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 CASP5P51878 434 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 ARPP19P56211 112 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 NHLH1Q02575 133 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 TCF15Q12870 199 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 LIN9Q5TKA1 542 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms