RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 HELQQ8TDG4 1101 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 MSTO1Q9BUK6 570 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 IGFLR1Q9H665 355 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 AGPAT5Q9NUQ2 364 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 FAM105AQ9NUU6 356 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 TNFSF13BQ9Y275 285 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 CNTNAP2Q9UHC6 1331 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 ZNF233A6NK53 670 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 EDN1P05305 212 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 AXLP30530 894 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 PBX3P40426 434 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 UBXN1Q04323 297 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 TWF2Q6IBS0 349 aaKnown RBP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 MPZL3Q6UWV2 235 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 MRPL10Q7Z7H8 261 aaKnown RBP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 USP37Q86T82 979 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 ABI1Q8IZP0 508 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 LPPQ93052 612 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 SAAL1Q96ER3 474 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 ZBTB45Q96K62 511 aaPredicted RBP13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 CLEC1BQ9P126 229 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 USP20Q9Y2K6 914 aa13.75□□□□□ -0.21
SSSCA1-203ENST00000526877 A0A0B4J269 797 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 B4GALT5O43286 388 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 TSPAN1O60635 241 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 TBX10O75333 385 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 OFD1O75665 1012 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 HARSP12081 509 aaKnown RBP13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 SKIP12755 728 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 NRIP1P48552 1158 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 MCL1Q07820 350 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 NOLC1Q14978 699 aaKnown RBP eCLIP13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 AMHR2Q16671 573 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 AGMOQ6ZNB7 445 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 MSLNLQ96KJ4 702 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 ADPGKQ9BRR6 497 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 FAM213AQ9BRX8 229 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 TLR9Q9NR96 1032 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
SSSCA1-203ENST00000526877 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 OGTO15294 1046 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 TEX33O43247 280 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 STX10O60499 249 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 GLP2RO95838 553 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 PTMAP06454 111 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 MCF2P10911 925 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 PROZP22891 400 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 RAB27AP51159 221 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 VAMP7P51809 220 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 ENPEPQ07075 957 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 BFSP1Q12934 665 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 KCNC3Q14003 757 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 KYAT1Q16773 422 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 VSTM4Q8IW00 320 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 MICAL1Q8TDZ2 1067 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 INTS13Q9NVM9 706 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
SSSCA1-203ENST00000526877 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms