RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SHISA7A6NL88 538 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 C2CD2LO14523 706 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 ALDH2P05091 517 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 PLCG1P19174 1290 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
NEDD8-204ENST00000526430 UBA7P41226 1012 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 ME1P48163 572 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 AASDHQ4L235 1098 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-204ENST00000526430 XKR9Q5GH70 373 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 EFCAB12Q6NXP0 572 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 GPR65Q8IYL9 337 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-204ENST00000526430 URGCPQ8TCY9 931 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 LPPQ93052 612 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
NEDD8-204ENST00000526430 GBP3Q9H0R5 595 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 GOLPH3LQ9H4A5 285 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 POLD4Q9HCU8 107 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 SEPT9Q9UHD8 586 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-204ENST00000526430 WASF3Q9UPY6 502 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 INPP5FQ9Y2H2 1132 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
NEDD8-204ENST00000526430 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 A0A1W2PQ27 194 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 A0A1W2PQ64 194 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 A0A1W2PQD8 194 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 NRP1O14786 923 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 TGM5O43548 720 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 GAS2O43903 313 aaKnown RBP12.02□□□□□ -0.49
NEDD8-204ENST00000526430 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.49
NEDD8-204ENST00000526430 ZMYND10O75800 440 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 DDHD2O94830 711 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 ARL2P36404 184 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 DSG1Q02413 1049 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 MAPK7Q13164 816 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 RINT1Q6NUQ1 792 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 LILRA6Q6PI73 481 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 LRRC71Q8N4P6 559 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 KCTD17Q8N5Z5 321 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
NEDD8-204ENST00000526430 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 FGF13Q92913 245 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 CEP170P1Q96L14 293 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 RUSC1Q9BVN2 902 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.491e-6■■■□□ 15.3
NEDD8-204ENST00000526430 FAM105AQ9NUU6 356 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 KANSL3Q9P2N6 904 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
NEDD8-204ENST00000526430 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 MEIS3P2A8K0S8 358 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 HRO43593 1189 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 ZNF806P0C7X5 589 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 CYP11B2P19099 503 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 FGFR4P22455 802 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 MCM6Q14566 821 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 STPG1Q5TH74 334 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
NEDD8-204ENST00000526430 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 DAW1Q8N136 415 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 PDILTQ8N807 584 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 RAD54LQ92698 747 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 DNASE1L2Q92874 299 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 GATA6Q92908 595 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 PGBD4Q96DM1 585 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 GPRC5CQ9NQ84 441 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 FNIP2Q9P278 1114 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 PCNX2A6NKB5 2137 aa12.01□□□□□ -0.49
NEDD8-204ENST00000526430 LAMA5O15230 3695 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 MAN2B1O00754 1011 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 ECI2O75521 394 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 PAPSS2O95340 614 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 HNRNPA1P09651 372 aaKnown RBP eCLIP12□□□□□ -0.49
NEDD8-204ENST00000526430 PLA2G4BP0C869 781 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 MYBP10242 640 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 PFKFB1P16118 471 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
NEDD8-204ENST00000526430 HOXA9P31269 272 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 NDUFA8P51970 172 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 CDC42EP1Q00587 391 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 CREMQ03060 361 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 EMC2Q15006 297 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 LONRF3Q496Y0 759 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
NEDD8-204ENST00000526430 GRASPQ7Z6J2 395 aaPredicted RBP12□□□□□ -0.49
NEDD8-204ENST00000526430 PALB2Q86YC2 1186 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms