RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 CBWD6Q4V339 395 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CBWD3Q5JTY5 395 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CBWD5Q5RIA9 395 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 MMS22LQ6ZRQ5 1243 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 ZNF571Q7Z3V5 609 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PCSK9Q8NBP7 692 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 APPL2Q8NEU8 664 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PPP1R14CQ8TAE6 165 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PGBD4Q96DM1 585 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 VPS37BQ9H9H4 285 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 SGPL1O95470 568 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 KRT3P12035 628 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 TSPY1Q01534 308 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CDR2Q01850 454 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 TAP1Q03518 808 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 SPIRE1Q08AE8 756 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CASC4Q6P4E1 433 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 GIMAP7Q8NHV1 300 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 ABCB6Q9NP58 842 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 SLC38A7Q9NVC3 462 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 OPLAHO14841 1288 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 LPXNO60711 386 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 EZRP15311 586 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CYP11B1P15538 503 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 THPOP40225 353 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 MEA1Q16626 185 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 DDX47Q9H0S4 455 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 EPC1Q9H2F5 836 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PRKAG2Q9UGJ0 569 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 PCSK1NQ9UHG2 260 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 UBQLN1Q9UMX0 589 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 CHD4Q14839 1912 aa9.39□□□□□ -0.91
PPFIA1-206ENST00000526262 SHANK3Q9BYB0 1731 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 CXCL8P10145 99 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 SLC1A1P43005 524 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 SARNPP82979 210 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PPP3CAQ08209 521 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MFSD10Q14728 455 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PSMD6Q15008 389 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PWP2Q15269 919 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 BSPRYQ5W0U4 402 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 HSPH1Q92598 858 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 RNPC3Q96LT9 517 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PODXLO00592 558 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 KRT7P08729 469 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PDGFRBP09619 1106 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MCF2P10911 925 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MYL6P60660 151 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PPP6R3Q5H9R7 873 aaPredicted RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 UHMK1Q8TAS1 419 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 THAP2Q9H0W7 228 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 KLK14Q9P0G3 267 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 CALCOCO1Q9P1Z2 691 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 NOC2LQ9Y3T9 749 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 ALG6Q9Y672 507 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 ZNF862O60290 1169 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 TRPA1O75762 1119 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 ZNF131P52739 623 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 CAPSQ13938 189 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 BRSK2Q8IWQ3 736 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 PALM2Q8IXS6 379 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 TATDN2Q93075 761 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 GPR20Q99678 358 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 MTG1Q9BT17 334 aaPredicted RBP9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 GOLPH3Q9H4A6 298 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 NFU1Q9UMS0 254 aa9.38□□□□□ -0.91
PPFIA1-206ENST00000526262 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 MAPK13O15264 365 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 RGS16O15492 202 aaPredicted RBP9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 GZMAP12544 262 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 PSEN2P49810 448 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 DLG4P78352 724 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 KCNMA1Q12791 1236 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 NOGQ13253 232 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 CUL1Q13616 776 aa9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 RNF187Q5TA31 235 aaPredicted RBP9.37□□□□□ -0.91
PPFIA1-206ENST00000526262 SPOPLQ6IQ16 392 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms