RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NEK4P51957 841 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 PEX3P56589 373 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 ADCY1Q08828 1119 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 DMWDQ09019 674 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 RAD51AP2Q09MP3 1159 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 TEAD2Q15562 447 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 UPP1Q16831 310 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 CTXN3Q4LDR2 81 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 CYP4A22Q5TCH4 519 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 CDCA2Q69YH5 1023 aaPredicted RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 PDXDC1Q6P996 788 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 ANKS3Q6ZW76 656 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 ERMNQ8TAM6 284 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 FAM3CQ92520 227 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 PRIMPOLQ96LW4 560 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 ZNF512Q96ME7 567 aaPredicted RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 NELL2Q99435 816 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 PLIN2Q99541 437 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 POLR3CQ9BUI4 534 aaPredicted RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 TRMT61BQ9BVS5 477 aaKnown RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 CCDC94Q9BW85 323 aaPredicted RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 CCDC113Q9H0I3 377 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 BHMT2Q9H2M3 363 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 FBXL5Q9UKA1 691 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 FBXO4Q9UKT5 387 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 KCNH3Q9ULD8 1083 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 NUB1Q9Y5A7 615 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 BACE2Q9Y5Z0 518 aa7.22□□□□□ -1.25
CD44-221ENST00000526000 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.22□□□□□ -1.25
CD44-221ENST00000526000 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.25
CD44-221ENST00000526000 OTOGLQ3ZCN5 2332 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 PP2D1A8MPX8 630 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 SLC16A4O15374 487 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ECI2O75521 394 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 C1RP00736 705 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 OR52Z1P0C646 297 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 TGM1P22735 817 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 HOXA9P31269 272 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 MATR3P43243 847 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD44-221ENST00000526000 GUCY2FP51841 1108 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 YARSP54577 528 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 SATB1Q01826 763 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 TWF1Q12792 350 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 PPP2R5AQ15172 486 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 SAFBQ15424 915 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD44-221ENST00000526000 CCDC6Q16204 474 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 DCAF4L1Q3SXM0 396 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ZNF568Q3ZCX4 644 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 IQCEQ6IPM2 695 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 VITQ6UXI7 678 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 RNF19BQ6ZMZ0 732 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 PDZD4Q76G19 769 aaPredicted RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 CCDC83Q8IWF9 413 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ZBTB44Q8NCP5 570 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ZNF461Q8TAF7 563 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 SECISBP2LQ93073 1101 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 GTF3C6Q969F1 213 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 CLDN23Q96B33 292 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 CHAMP1Q96JM3 812 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ACAP3Q96P50 834 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 PGLYRP2Q96PD5 576 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ACO2Q99798 780 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 OSBPL6Q9BZF3 934 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 CDT1Q9H211 546 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 SLITRK6Q9H5Y7 841 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 ZNF334Q9HCZ1 680 aaPredicted RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 DDX19AQ9NUU7 478 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 GDE1Q9NZC3 331 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 CEP72Q9P209 647 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 GMEB2Q9UKD1 530 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 CDV3Q9UKY7 258 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 RAB23Q9ULC3 237 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 TNFSF13BQ9Y275 285 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 SLC27A5Q9Y2P5 690 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 MRPS17Q9Y2R5 130 aaKnown RBP7.21□□□□□ -1.26
CD44-221ENST00000526000 PCDHGA2Q9Y5H1 932 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 PIAS3Q9Y6X2 628 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 NCOR2Q9Y618 2525 aa7.21□□□□□ -1.26
CD44-221ENST00000526000 TPRP12270 2363 aaKnown RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 CEP250Q9BV73 2442 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 DENND4AQ7Z401 1863 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ARHGEF37A1IGU5 675 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 SLC38A8A6NNN8 435 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 HEPACAM2A8MVW5 462 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 H7C4K7 107 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ZNF197O14709 1029 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ZNF263O14978 683 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 AXIN1O15169 862 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 SPTLC1O15269 473 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 MEFVO15553 781 aaPredicted RBP7.2□□□□□ -1.26
CD44-221ENST00000526000 HRO43593 1189 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 GDF9O60383 454 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 HIP1RO75146 1068 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 MOSPD3O75425 235 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 SOAT2O75908 522 aa7.2□□□□□ -1.26
CD44-221ENST00000526000 ABLIM3O94929 683 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms