RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZMAT2Q96NC0 199 aaKnown RBP26.27■■□□□ 1.8
USP47-205ENST00000525257 SLC38A7Q9NVC3 462 aa26.27■■□□□ 1.8
USP47-205ENST00000525257 DAXXQ9UER7 740 aaPredicted RBP26.27■■□□□ 1.8
USP47-205ENST00000525257 ARHGEF37A1IGU5 675 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 PTPN2P17706 415 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 XKR4Q5GH76 650 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 ZBTB41Q5SVQ8 909 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 TANGO2Q6ICL3 276 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 C4orf32Q8N8J7 132 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 CORO1BQ9BR76 489 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 TARS2Q9BW92 718 aaKnown RBP26.26■■□□□ 1.79
USP47-205ENST00000525257 MRPL4Q9BYD3 311 aaKnown RBP26.26■■□□□ 1.79
USP47-205ENST00000525257 PTPRHQ9HD43 1115 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 AVENQ9NQS1 362 aaPredicted RBP26.26■■□□□ 1.79
USP47-205ENST00000525257 HEBP1Q9NRV9 189 aa26.26■■□□□ 1.79
USP47-205ENST00000525257 ABLIM3O94929 683 aa26.25■■□□□ 1.79
USP47-205ENST00000525257 MAGEA9P43362 315 aa26.25■■□□□ 1.79
USP47-205ENST00000525257 TAS1R3Q7RTX0 852 aa26.25■■□□□ 1.79
USP47-205ENST00000525257 DAW1Q8N136 415 aa26.25■■□□□ 1.79
USP47-205ENST00000525257 CYP4F11Q9HBI6 524 aa26.25■■□□□ 1.79
USP47-205ENST00000525257 NOL7Q9UMY1 257 aaKnown RBP26.25■■□□□ 1.79
USP47-205ENST00000525257 CITO14578 2027 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 MED19A0JLT2 244 aaPredicted RBP26.24■■□□□ 1.79
USP47-205ENST00000525257 E9PMD0 336 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 SPTLC1O15269 473 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 HIP1RO75146 1068 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 HARSP12081 509 aaKnown RBP26.24■■□□□ 1.79
USP47-205ENST00000525257 DMP1Q13316 513 aaPredicted RBP26.24■■□□□ 1.79
USP47-205ENST00000525257 FBXO18Q8NFZ0 1043 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 C18orf25Q96B23 403 aaPredicted RBP26.24■■□□□ 1.79
USP47-205ENST00000525257 ELSPBP1Q96BH3 223 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 TCEAL4Q96EI5 215 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 TCHPQ9BT92 498 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 TMEM134Q9H6X4 195 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 LIMCH1Q9UPQ0 1083 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 NUB1Q9Y5A7 615 aa26.24■■□□□ 1.79
USP47-205ENST00000525257 SYN3O14994 580 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 SEC24AO95486 1093 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 ATF2P15336 505 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 FCARP24071 287 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 TRAPPC10P48553 1259 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 GRM2Q14416 872 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 PUM1Q14671 1186 aaKnown RBP eCLIP26.23■■□□□ 1.79
USP47-205ENST00000525257 PRSS36Q5K4E3 855 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 ZNF852Q6ZMS4 543 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 ATRIPQ8WXE1 791 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 CLDN23Q96B33 292 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 ACAP3Q96P50 834 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 LLPHQ9BRT6 129 aaKnown RBP26.23■■□□□ 1.79
USP47-205ENST00000525257 KMT5AQ9NQR1 393 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 ARHGAP28Q9P2N2 729 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 NCDNQ9UBB6 729 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 FBXL5Q9UKA1 691 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 PCDHGA2Q9Y5H1 932 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 INSL5Q9Y5Q6 135 aa26.23■■□□□ 1.79
USP47-205ENST00000525257 PP2D1A8MPX8 630 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 H7C4K7 107 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 NCAM2O15394 837 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 TBC1D4O60343 1298 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 MCF2P10911 925 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 KCNE1P15382 129 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 PDIA5Q14554 519 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 TSSK4Q6SA08 328 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 TCEAL8Q8IYN2 117 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 IGSF22Q8N9C0 903 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 NELL2Q99435 816 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 RUSC1Q9BVN2 902 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 CNTN3Q9P232 1028 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 DNM3Q9UQ16 869 aa26.22■■□□□ 1.79
USP47-205ENST00000525257 PROZP22891 400 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 CCR2P41597 374 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 PTGDRQ13258 359 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 CTXN3Q4LDR2 81 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 FAM78AQ5JUQ0 283 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 MPZL3Q6UWV2 235 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 PDZD4Q76G19 769 aaPredicted RBP26.21■■□□□ 1.79
USP47-205ENST00000525257 DNASE1L2Q92874 299 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 DRC1Q96MC2 740 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 RAB34Q9BZG1 259 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 BRD9Q9H8M2 597 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 MRPS17Q9Y2R5 130 aaKnown RBP26.21■■□□□ 1.79
USP47-205ENST00000525257 STK24Q9Y6E0 443 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 NCOR2Q9Y618 2525 aa26.21■■□□□ 1.79
USP47-205ENST00000525257 PDCD11Q14690 1871 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 SHISA7A6NL88 538 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 NRG2O14511 850 aaPredicted RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 ABLIM1O14639 778 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 MEFVO15553 781 aaPredicted RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 NEFLP07196 543 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 RPL9P32969 192 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 RPS9P46781 194 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 MAPK7Q13164 816 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 MRPL58Q14197 206 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 FAM184AQ8NB25 1140 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 ZBTB45Q96K62 511 aaPredicted RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 ZFP14Q9HCL3 533 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 ZSCAN32Q9NX65 697 aa26.2■■□□□ 1.78
USP47-205ENST00000525257 NDRG2Q9UN36 371 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 RBM19Q9Y4C8 960 aaKnown RBP26.2■■□□□ 1.78
USP47-205ENST00000525257 PCDHB6Q9Y5E3 794 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms