RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 PSMD5Q16401 504 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 RRAGBQ5VZM2 374 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 ZPBP2Q6X784 338 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 GPBP1Q86WP2 473 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 FBXL6Q8N531 539 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
SMCO4-202ENST00000525141 LEO1Q8WVC0 666 aaPredicted RBP13.7□□□□□ -0.22
SMCO4-202ENST00000525141 RSAD2Q8WXG1 361 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
SMCO4-202ENST00000525141 KCNK12Q9HB15 430 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 CNTN3Q9P232 1028 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 FBXW11Q9UKB1 542 aa13.7□□□□□ -0.22
SMCO4-202ENST00000525141 CITO14578 2027 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 ADRB2P07550 413 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 AVPR2P30518 371 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 TNFSF9P41273 254 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 YARSP54577 528 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 NTHL1P78549 312 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 SPAG1Q07617 926 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 STRN3Q13033 797 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 SLC39A4Q6P5W5 647 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 CCDC149Q6ZUS6 474 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 OTOP3Q7RTS5 596 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 MYCT1Q8N699 235 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 PRSS33Q8NF86 280 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 DDX27Q96GQ7 796 aaKnown RBP13.69□□□□□ -0.22
SMCO4-202ENST00000525141 UROC1Q96N76 676 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 IKZF4Q9H2S9 585 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 MTRRQ9UBK8 725 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 ODF2LQ9ULJ1 636 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 BACE2Q9Y5Z0 518 aa13.69□□□□□ -0.22
SMCO4-202ENST00000525141 A0A087X0B3 334 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 TTC26A0AVF1 554 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 PODXLO00592 558 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 CLDN3O15551 220 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 TRAK2O60296 914 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 PIGRP01833 764 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 GTF2BQ00403 316 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 ELAVL2Q12926 359 aaKnown RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 RESP18Q5W5W9 173 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 UBALD2Q8IYN6 164 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 SLC44A3Q8N4M1 653 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 STRA6Q9BX79 667 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 KCNH6Q9H252 994 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 LARSQ9P2J5 1176 aaKnown RBP13.68□□□□□ -0.22
SMCO4-202ENST00000525141 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
SMCO4-202ENST00000525141 A0A0B4J269 797 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 MYMKA6NI61 221 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 ABLIM3O94929 683 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CXCL8P10145 99 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 LAMP2P13473 410 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 NPR3P17342 541 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CMA1P23946 247 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 NHLH1Q02575 133 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CREMQ03060 361 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 TCF15Q12870 199 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 TDGQ13569 410 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 GRASPQ7Z6J2 395 aaPredicted RBP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 PHOX2BQ99453 314 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 PYM1Q9BRP8 204 aaKnown RBP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
SMCO4-202ENST00000525141 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 FAM13BQ9NYF5 915 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 TUBGCP4Q9UGJ1 667 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CDY1Q9Y6F8 540 aa13.67□□□□□ -0.22
SMCO4-202ENST00000525141 CLUHO75153 1309 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 PDCD11Q14690 1871 aaKnown RBP13.66□□□□□ -0.22
SMCO4-202ENST00000525141 TISP43B9A030 160 aa13.66□□□□□ -0.22
SMCO4-202ENST00000525141 ANHXE9PGG2 379 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms