RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 C1orf127Q8N9H9 656 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 CEP63Q96MT8 703 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 CGRRF1Q99675 332 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 ALG13Q9NP73 1137 aaKnown RBP16.91■□□□□ 0.3
RB1-205ENST00000525036 DPP3Q9NY33 737 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 SIX4Q9UIU6 781 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 UBQLN1Q9UMX0 589 aaKnown RBP16.91■□□□□ 0.3
RB1-205ENST00000525036 DERAQ9Y315 318 aa16.91■□□□□ 0.3
RB1-205ENST00000525036 I3L4J1 428 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 PODXLO00592 558 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 MAPK13O15264 365 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
RB1-205ENST00000525036 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 TNNI1P19237 187 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 ALDH7A1P49419 539 aaKnown RBP16.9■□□□□ 0.3
RB1-205ENST00000525036 MCCD1P59942 119 aaPredicted RBP16.9■□□□□ 0.3
RB1-205ENST00000525036 CLDN10P78369 228 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 PPP3CAQ08209 521 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 GRIN2CQ14957 1233 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 NCAPHQ15003 741 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 RALGAPA2Q2PPJ7 1873 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
RB1-205ENST00000525036 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 IGSF21Q96ID5 467 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 MKNK1Q9BUB5 465 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 SPG21Q9NZD8 308 aa16.9■□□□□ 0.3
RB1-205ENST00000525036 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
RB1-205ENST00000525036 SZT2Q5T011 3432 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 CDH23Q9H251 3354 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 SPTLC1O15269 473 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 GRM6O15303 877 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 LRRN2O75325 713 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 FGF18O76093 207 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 EPB41P11171 864 aaKnown RBP16.89■□□□□ 0.29
RB1-205ENST00000525036 CYP3A5P20815 502 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
RB1-205ENST00000525036 BFSP1Q12934 665 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 HSP90AA2PQ14568 343 aaPredicted RBP16.89■□□□□ 0.29
RB1-205ENST00000525036 CT47A1Q5JQC4 288 aaPredicted RBP16.89■□□□□ 0.29
RB1-205ENST00000525036 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 DHX40Q8IX18 779 aaKnown RBP16.89■□□□□ 0.29
RB1-205ENST00000525036 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 GDPD5Q8WTR4 605 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 RSPH1Q8WYR4 309 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 B3GALT6Q96L58 329 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 FANCLQ9NW38 375 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
RB1-205ENST00000525036 PDCD11Q14690 1871 aaKnown RBP16.89■□□□□ 0.29
RB1-205ENST00000525036 ANO9A1A5B4 782 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 PIRO00625 290 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 LPXNO60711 386 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 CSPG5O95196 566 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 VNN1O95497 513 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 EFEMP2O95967 443 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 CST3P01034 146 aaPredicted RBP16.88■□□□□ 0.29
RB1-205ENST00000525036 C4BPAP04003 597 aaKnown RBP16.88■□□□□ 0.29
RB1-205ENST00000525036 ITGB3P05106 788 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 LRPAP1P30533 357 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 BRCC3P46736 316 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 GCLMP48507 274 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 CAMK1Q14012 370 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 SURF1Q15526 300 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 TDRD10Q5VZ19 366 aaKnown RBP16.88■□□□□ 0.29
RB1-205ENST00000525036 DCLRE1AQ6PJP8 1040 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
RB1-205ENST00000525036 TRAPPC11Q7Z392 1133 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 CREBRFQ8IUR6 639 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 AOPEPQ8N6M6 819 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 SPPL3Q8TCT6 385 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 TSPAN18Q96SJ8 248 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 PRDM12Q9H4Q4 367 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
RB1-205ENST00000525036 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
RB1-205ENST00000525036 B3GAT3O94766 335 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 TMEM191BP0C7N4 346 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 KRT13P13646 458 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
RB1-205ENST00000525036 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
RB1-205ENST00000525036 GPM6BQ13491 265 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
RB1-205ENST00000525036 DUOXA2Q1HG44 320 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
RB1-205ENST00000525036 SLC35C1Q96A29 364 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
RB1-205ENST00000525036 UROC1Q96N76 676 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 COLEC11Q9BWP8 271 aa16.87■□□□□ 0.29
RB1-205ENST00000525036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.87■□□□□ 0.296e-9■■■■■ 134.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms