RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FANCLQ9NW38 375 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 PRSS50Q9UI38 385 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 TMPRSS11EQ9UL52 423 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 PPP2R3BQ9Y5P8 575 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 CPSF1Q10570 1443 aaKnown RBP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 A0A1W2PP64 1363 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 CCDC7Q96M83 1385 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 COL18A1P39060 1754 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 AHRRA9YTQ3 701 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 PRR5-ARHGAP8B1AHC4 643 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 DIRC3C9JPN6 131 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 KDM1AO60341 852 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 CDC45O75419 566 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 LMNAP02545 664 aaKnown RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 LTA4HP09960 611 aaKnown RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 HSP90B1P14625 803 aaKnown RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 BMP5P22003 454 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 ADCYAP1R1P41586 468 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 TAP1Q03518 808 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 PPARAQ07869 468 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 DRICH1Q6PGQ1 229 aaPredicted RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 GDF7Q7Z4P5 450 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 VRK3Q8IV63 474 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 SLC41A1Q8IVJ1 513 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 MFSD3Q96ES6 412 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 GPR101Q96P66 508 aaPredicted RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 SLC12A5Q9H2X9 1139 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 EVLQ9UI08 416 aaPredicted RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 KCNG1Q9UIX4 513 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 CHST2Q9Y4C5 530 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 SSH2Q76I76 1423 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 PEAK1Q9H792 1746 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 POLR3AO14802 1390 aaPredicted RBP4□□□□□ -1.77
CSDE1-208ENST00000524652 PLCH1Q4KWH8 1693 aa4□□□□□ -1.77
CSDE1-208ENST00000524652 ACEP12821 1306 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 EVC2Q86UK5 1308 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 NRAPQ86VF7 1730 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 USP6P35125 1406 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 TMEM200CA6NKL6 621 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 B5MCH6 92 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 FKBP9O95302 570 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 ATF3P18847 181 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 FBLP22087 321 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 TGM1P22735 817 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 MGAT1P26572 445 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 APOBEC3AP31941 199 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 PRELPP51888 382 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 IL2P60568 153 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 TMF1P82094 1093 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 DDB1Q16531 1140 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 C21orf62-AS1Q17RA5 79 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 C19orf54Q5BKX5 351 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 DALRD3Q5D0E6 543 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 FKBP9P1Q75LS8 142 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 PLXDC1Q8IUK5 500 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 LYSMD2Q8IV50 215 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 LILRA3Q8N6C8 439 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 PAWRQ96IZ0 340 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 CDC5LQ99459 802 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 MS4A5Q9H3V2 200 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 ZNF768Q9H5H4 540 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 EMC7Q9NPA0 242 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 TRPM5Q9NZQ8 1165 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 VIRMAQ69YN4 1812 aaKnown RBP3.99□□□□□ -1.77
CSDE1-208ENST00000524652 COL4A3Q01955 1670 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 LRP6O75581 1613 aa3.99□□□□□ -1.77
CSDE1-208ENST00000524652 WNK3Q9BYP7 1800 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 CENPVL1A0A0U1RR11 272 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 LCHNA4D1U4 455 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 RNASET2O00584 256 aaKnown RBP3.98□□□□□ -1.77
CSDE1-208ENST00000524652 TOM1O60784 492 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 PRAMEF4O60810 478 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 RAB11FIP3O75154 756 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 TMEM127O75204 238 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 GASTP01350 101 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 APBA1Q02410 837 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 TRIM25Q14258 630 aaKnown RBP3.98□□□□□ -1.77
CSDE1-208ENST00000524652 UBE3CQ15386 1083 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 HECTD2Q5U5R9 776 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 BROXQ5VW32 411 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 DPY19L2P1Q6NXN4 242 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 KIAA0907Q7Z7F0 614 aaPredicted RBP3.98□□□□□ -1.77
CSDE1-208ENST00000524652 PRIMA1Q86XR5 153 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 XYLT1Q86Y38 959 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 ARHGEF19Q8IW93 802 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 DHX37Q8IY37 1157 aaKnown RBP3.98□□□□□ -1.77
CSDE1-208ENST00000524652 SNX33Q8WV41 574 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 CYP4F11Q9HBI6 524 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 CDY2AQ9Y6F7 541 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 SLIT3O75094 1523 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 NFAT5O94916 1531 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 UTRNP46939 3433 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 ANKRD36BQ8N2N9 1353 aa3.98□□□□□ -1.77
CSDE1-208ENST00000524652 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 OVOS2A0A0J9YW53 1432 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 TNS3Q68CZ2 1445 aa3.97□□□□□ -1.77
CSDE1-208ENST00000524652 OVOS2Q6IE36 1432 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms