RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 NEU2Q9Y3R4 380 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 MYBL1P10243 752 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 RRM1P23921 792 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 RXRBP28702 533 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 PTPN4P29074 926 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 MAGEA4P43358 317 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 PTDSS1P48651 473 aaKnown RBP10.9□□□□□ -0.66
SPIDR-225ENST00000524141 MXRA7P84157 204 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 TNIP1Q15025 636 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 FYB2Q5VWT5 728 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-225ENST00000524141 DNAJC9Q8WXX5 260 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 KAT5Q92993 513 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 SLC7A6OSQ96CW6 309 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-225ENST00000524141 C9orf72Q96LT7 481 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 VCXQ9H320 206 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 PCIF1Q9H4Z3 704 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 TLE6Q9H808 572 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 HSPBP1Q9NZL4 362 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 MROH7Q68CQ1 1323 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 ATRNL1Q5VV63 1379 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 F5H6K3 240 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 MARK3P27448 753 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 CNGA1P29973 690 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 VPS41P49754 854 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 MUM1Q2TAK8 710 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 C1orf220Q5T0J3 134 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 KIAA0825Q8IV33 1275 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 SLC17A8Q8NDX2 589 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 C10orf82Q8WW14 230 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 COA1Q9GZY4 146 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
SPIDR-225ENST00000524141 CPSF2Q9P2I0 782 aaKnown RBP10.9□□□□□ -0.66
SPIDR-225ENST00000524141 ZMYND8Q9ULU4 1186 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-225ENST00000524141 DPPA5A6NC42 116 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 C2CD2LO14523 706 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 NDC80O14777 642 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 SMIM24O75264 130 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 SNUPNO95149 360 aaKnown RBP10.89□□□□□ -0.67
SPIDR-225ENST00000524141 GM2AP17900 193 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 EPHB2P29323 1055 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 KLF1Q13351 362 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-225ENST00000524141 RASA2Q15283 850 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 LLGL1Q15334 1064 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 ZRSR2Q15696 482 aaKnown RBP10.89□□□□□ -0.67
SPIDR-225ENST00000524141 CLEC16AQ2KHT3 1053 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 CYP4F22Q6NT55 531 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 ZNF449Q6P9G9 518 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 HHIPL2Q6UWX4 724 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 TMEM179Q6ZVK1 233 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 DAW1Q8N136 415 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 IWS1Q96ST2 819 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 LXNQ9BS40 222 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 TUBB6Q9BUF5 446 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 PSTPIP1O43586 416 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 T-ENOLP0DO92 83 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
SPIDR-225ENST00000524141 ADRA2BP18089 450 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 KRT15P19012 456 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 SNAP25P60880 206 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 HHATQ5VTY9 493 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 KRT39Q6A163 491 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 ANKS1BQ7Z6G8 1248 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 TEKT1Q969V4 418 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
SPIDR-225ENST00000524141 NT5C1BQ96P26 610 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 CBWD1Q9BRT8 395 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 ZFP69BQ9UJL9 534 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
SPIDR-225ENST00000524141 EME2A4GXA9 379 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 ECE2O60344 883 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 SPAG7O75391 227 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 ZWINTO95229 277 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 NDUFB10O96000 172 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 TROVE2P10155 538 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 BMP3P12645 472 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 CA4P22748 312 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 VHLP40337 213 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 PAPOLAP51003 745 aaKnown RBP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 GPC3P51654 580 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 MCCD1P59942 119 aaPredicted RBP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 PRR5LQ6MZQ0 368 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 IRGCQ6NXR0 463 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 CCDC125Q86Z20 511 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 ZBTB10Q96DT7 871 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 ZNF577Q9BSK1 485 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 TEKT3Q9BXF9 490 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 KIAA1586Q9HCI6 787 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 SSU72Q9NP77 194 aaKnown RBP10.88□□□□□ -0.67
SPIDR-225ENST00000524141 SLCO1B3Q9NPD5 702 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 KCNQ5Q9NR82 932 aa10.88□□□□□ -0.67
SPIDR-225ENST00000524141 PAPOLBQ9NRJ5 636 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms