RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SMOC2Q9H3U7 446 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 GOLGA2P5Q9HBQ8 144 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 CDH7Q9ULB5 785 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 KCNH3Q9ULD8 1083 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 CDY1Q9Y6F8 540 aa9.68□□□□□ -0.86
CTNNA1-240ENST00000523912 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 LRG1P02750 347 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 CFHP08603 1231 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 PLCG1P19174 1290 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 MARCKSP29966 332 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 MCL1Q07820 350 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 HTR4Q13639 388 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 PABPC1LQ4VXU2 614 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 AXDND1Q5T1B0 1012 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 ZNF280DQ6N043 979 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 ALKAL1Q6UXT8 129 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 MYCT1Q8N699 235 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 FEZF2Q8TBJ5 459 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 BORCS6Q96GS4 357 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 TSPAN18Q96SJ8 248 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 REEP2Q9BRK0 252 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 CXCL16Q9H2A7 254 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 ZHX3Q9H4I2 956 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 WNT16Q9UBV4 365 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 WDFY4Q6ZS81 3184 aa9.67□□□□□ -0.86
CTNNA1-240ENST00000523912 EP300Q09472 2414 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 DENND4AQ7Z401 1863 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ARHGEF37A1IGU5 675 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ANHXE9PGG2 379 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 I3L4J1 428 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ABLIM1O14639 778 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ADAM12O43184 909 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 N4BP1O75113 896 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 CXCL8P10145 99 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 NPR3P17342 541 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 BRCC3P46736 316 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ID4P47928 161 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 SOX4Q06945 474 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 DHX8Q14562 1220 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 SF3A1Q15459 793 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 CTXN3Q4LDR2 81 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 CWF19L1Q69YN2 538 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 SLC8B1Q6J4K2 584 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 HAUS6Q7Z4H7 955 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 SLC44A3Q8N4M1 653 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 LARP4BQ92615 738 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 RAD54LQ92698 747 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 KCNN1Q92952 543 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 C18orf25Q96B23 403 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 SHDQ96IW2 340 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 MSTO1Q9BUK6 570 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 OXCT2Q9BYC2 517 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 RPF1Q9H9Y2 349 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 ARHGEF3Q9NR81 526 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 MAFFQ9ULX9 164 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 TBX20Q9UMR3 447 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 MRPS23Q9Y3D9 190 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 NUMBLQ9Y6R0 609 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
CTNNA1-240ENST00000523912 NPHP3-ACAD11A0A0J9YXS1 232 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 NARSO43776 548 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 TRAK2O60296 914 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 PIGRP01833 764 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 CYP3A5P20815 502 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 PAX3P23760 479 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ZNF131P52739 623 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ARPP19P56211 112 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 PFKPQ01813 784 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ROR1Q01973 937 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 CUL4AQ13619 759 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 KARSQ15046 597 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 SLC10A6Q3KNW5 377 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 TPGS2Q68CL5 300 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 IQCEQ6IPM2 695 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 FRMD5Q7Z6J6 570 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 USP37Q86T82 979 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 CD302Q8IX05 232 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ADSSL1Q8N142 457 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 DTWD2Q8NBA8 298 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 RSAD2Q8WXG1 361 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 FGF13Q92913 245 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ZBTB45Q96K62 511 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 TBC1D17Q9HA65 648 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 CYP4F11Q9HBI6 524 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 SLC2A4RGQ9NR83 387 aa9.65□□□□□ -0.86
CTNNA1-240ENST00000523912 GDE1Q9NZC3 331 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms