RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MRPS17Q9Y2R5 130 aaKnown RBP28.45■■■□□ 2.14
PVT1-219ENST00000523427 DNAH14Q0VDD8 3507 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 PODXLO00592 558 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 HARSP12081 509 aaKnown RBP28.44■■■□□ 2.14
PVT1-219ENST00000523427 PEX3P56589 373 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 ADCY1Q08828 1119 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 MTAPQ13126 283 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 SECISBP2LQ93073 1101 aaKnown RBP28.44■■■□□ 2.14
PVT1-219ENST00000523427 ELSPBP1Q96BH3 223 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 TCHPQ9BT92 498 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 CDT1Q9H211 546 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 TOPORSQ9NS56 1045 aaPredicted RBP28.44■■■□□ 2.14
PVT1-219ENST00000523427 TNFSF13BQ9Y275 285 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 NUB1Q9Y5A7 615 aa28.44■■■□□ 2.14
PVT1-219ENST00000523427 TRIP11Q15643 1979 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 SEC24AO95486 1093 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 GRM5P41594 1212 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 FAM78AQ5JUQ0 283 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 HAUS3Q68CZ6 603 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 ZBTB44Q8NCP5 570 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 ZMAT2Q96NC0 199 aaKnown RBP28.43■■■□□ 2.14
PVT1-219ENST00000523427 ZFP14Q9HCL3 533 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 USP18Q9UMW8 372 aa28.43■■■□□ 2.14
PVT1-219ENST00000523427 ARHGEF37A1IGU5 675 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 NRG2O14511 850 aaPredicted RBP28.42■■■□□ 2.14
PVT1-219ENST00000523427 ABLIM3O94929 683 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 LPAL2Q16609 132 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 TTC38Q5R3I4 469 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 SLC8B1Q6J4K2 584 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 PDZD4Q76G19 769 aaPredicted RBP28.42■■■□□ 2.14
PVT1-219ENST00000523427 HS6ST3Q8IZP7 471 aa28.42■■■□□ 2.14
PVT1-219ENST00000523427 ACO2Q99798 780 aaKnown RBP28.42■■■□□ 2.14
PVT1-219ENST00000523427 TARS2Q9BW92 718 aaKnown RBP28.42■■■□□ 2.14
PVT1-219ENST00000523427 DDX19AQ9NUU7 478 aaKnown RBP28.42■■■□□ 2.14
PVT1-219ENST00000523427 PATJQ8NI35 1801 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 ATF2P15336 505 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 CCR2P41597 374 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 ST3GAL1Q11201 340 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 FZD5Q13467 585 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 CTXN3Q4LDR2 81 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 PRSS36Q5K4E3 855 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 C18orf25Q96B23 403 aaPredicted RBP28.41■■■□□ 2.14
PVT1-219ENST00000523427 C8orf76Q96K31 380 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 TRMT61BQ9BVS5 477 aaKnown RBP28.41■■■□□ 2.14
PVT1-219ENST00000523427 AVENQ9NQS1 362 aaPredicted RBP28.41■■■□□ 2.14
PVT1-219ENST00000523427 SLC38A7Q9NVC3 462 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 LRWD1Q9UFC0 647 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 FBXL5Q9UKA1 691 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 INSL5Q9Y5Q6 135 aa28.41■■■□□ 2.14
PVT1-219ENST00000523427 SHISA7A6NL88 538 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 H7C4K7 107 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 ZNF197O14709 1029 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 MYL4P12829 197 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 GJA1P17302 382 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 FCARP24071 287 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 GDI1P31150 447 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 RPS9P46781 194 aaKnown RBP28.4■■■□□ 2.14
PVT1-219ENST00000523427 NPTX2P47972 431 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 GNL2Q13823 731 aaKnown RBP28.4■■■□□ 2.14
PVT1-219ENST00000523427 NBR1Q14596 966 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 CYP4A22Q5TCH4 519 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 ZSWIM3Q96MP5 696 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 ACAP3Q96P50 834 aa28.4■■■□□ 2.14
PVT1-219ENST00000523427 MRPL4Q9BYD3 311 aaKnown RBP28.4■■■□□ 2.14
PVT1-219ENST00000523427 F5P12259 2224 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 ATXN1P54253 815 aaKnown RBP28.39■■■□□ 2.14
PVT1-219ENST00000523427 IQCEQ6IPM2 695 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 ALKAL1Q6UXT8 129 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 TCEAL8Q8IYN2 117 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 ELMOD1Q8N336 334 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 DNASE1L2Q92874 299 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 BORCS6Q96GS4 357 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 EPC1Q9H2F5 836 aa28.39■■■□□ 2.14
PVT1-219ENST00000523427 SYN3O14994 580 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 LILRB5O75023 590 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 MCM4P33991 863 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 VIPR2P41587 438 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 XKR4Q5GH76 650 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 GPR161Q8N6U8 529 aaKnown RBP28.38■■■□□ 2.13
PVT1-219ENST00000523427 SNX29Q8TEQ0 813 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 ZNF512Q96ME7 567 aaPredicted RBP28.38■■■□□ 2.13
PVT1-219ENST00000523427 LMAN1LQ9HAT1 526 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 KMT5AQ9NQR1 393 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 PRMT8Q9NR22 394 aaPredicted RBP28.38■■■□□ 2.13
PVT1-219ENST00000523427 CDV3Q9UKY7 258 aaKnown RBP28.38■■■□□ 2.13
PVT1-219ENST00000523427 PHLPP2Q6ZVD8 1323 aa28.38■■■□□ 2.13
PVT1-219ENST00000523427 E9PMD0 336 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 MAN2B1O00754 1011 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 TBC1D4O60343 1298 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 MUTP22033 750 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 TWF1Q12792 350 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 DMP1Q13316 513 aaPredicted RBP28.37■■■□□ 2.13
PVT1-219ENST00000523427 SEZ6Q53EL9 994 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 CCDC83Q8IWF9 413 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 FAM3CQ92520 227 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 NELL1Q92832 810 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 ZBTB45Q96K62 511 aaPredicted RBP28.37■■■□□ 2.13
PVT1-219ENST00000523427 ASB16Q96NS5 453 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 PTPRHQ9HD43 1115 aa28.37■■■□□ 2.13
PVT1-219ENST00000523427 GMEB2Q9UKD1 530 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms