RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 CYP2A13Q16696 494 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 ZNF362Q5T0B9 420 aaPredicted RBP5.34□□□□□ -1.55
CLK4-213ENST00000523013 RNF219Q5W0B1 726 aaPredicted RBP5.34□□□□□ -1.55
CLK4-213ENST00000523013 FBXO42Q6P3S6 717 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 Q6ZNX1 250 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 FAM43AQ8N2R8 423 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 SLC9A6Q92581 669 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 CYFIP2Q96F07 1278 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
CLK4-213ENST00000523013 GALNT9Q9HCQ5 603 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 TESQ9UGI8 421 aaKnown RBP5.34□□□□□ -1.55
CLK4-213ENST00000523013 DNM3Q9UQ16 869 aa5.34□□□□□ -1.55
CLK4-213ENST00000523013 RUVBL1Q9Y265 456 aaKnown RBP5.34□□□□□ -1.55
CLK4-213ENST00000523013 CNGA1P29973 690 aa5.33□□□□□ -1.56
CLK4-213ENST00000523013 NOMO3P69849 1222 aa5.33□□□□□ -1.56
CLK4-213ENST00000523013 ZNF169Q14929 603 aaPredicted RBP5.33□□□□□ -1.56
CLK4-213ENST00000523013 ERCC6LQ2NKX8 1250 aa5.33□□□□□ -1.56
CLK4-213ENST00000523013 NOMO2Q5JPE7 1267 aa5.33□□□□□ -1.56
CLK4-213ENST00000523013 MARS2Q96GW9 593 aaKnown RBP5.33□□□□□ -1.56
CLK4-213ENST00000523013 HSFX1Q9UBD0 423 aa5.33□□□□□ -1.56
CLK4-213ENST00000523013 PHLDB1Q86UU1 1377 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 COL11A2P13942 1736 aaPredicted RBP5.32□□□□□ -1.56
CLK4-213ENST00000523013 SPATA31A6Q5VVP1 1343 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 TCRBV7S2A1N4TA0A589 114 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 MGST3O14880 152 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 DDCP20711 480 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 VAV2P52735 878 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 SIM1P81133 766 aaPredicted RBP5.32□□□□□ -1.56
CLK4-213ENST00000523013 SLFN5Q08AF3 891 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 DACT2Q5SW24 774 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 NRG4Q8WWG1 115 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 DPF2Q92785 391 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 LRFN3Q9BTN0 628 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 GSTO2Q9H4Y5 243 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 MANSC1Q9H8J5 431 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 TBCCD1Q9NVR7 557 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
CLK4-213ENST00000523013 WASHC2AQ641Q2 1341 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 MYBBP1AQ9BQG0 1328 aaKnown RBP5.31□□□□□ -1.56
CLK4-213ENST00000523013 CDHR4A6H8M9 788 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 ALAS1P13196 640 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 ZNF37AP17032 561 aaPredicted RBP5.31□□□□□ -1.56
CLK4-213ENST00000523013 CD38P28907 300 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 WASP42768 502 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 KLF1Q13351 362 aaPredicted RBP5.31□□□□□ -1.56
CLK4-213ENST00000523013 DCBLD1Q8N8Z6 715 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 BOLLQ8N9W6 283 aaKnown RBP5.31□□□□□ -1.56
CLK4-213ENST00000523013 Q8NA96 180 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 NUP133Q8WUM0 1156 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 RSAD1Q9HA92 442 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 CASS4Q9NQ75 786 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 TLK1Q9UKI8 766 aa5.31□□□□□ -1.56
CLK4-213ENST00000523013 MTO1Q9Y2Z2 717 aaKnown RBP5.31□□□□□ -1.56
CLK4-213ENST00000523013 MYADML2A6NDP7 307 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 SLC6A4P31645 630 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 RARRES1P49788 294 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 GEN1Q17RS7 908 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 INAVAQ3KP66 663 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 FOXR2Q6PJQ5 311 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 FITM2Q8N6M3 262 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 PPM1NQ8N819 430 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 ATL2Q8NHH9 583 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 CAGE1Q8TC20 777 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 PTCD3Q96EY7 689 aaKnown RBP5.3□□□□□ -1.56
CLK4-213ENST00000523013 PDLIM2Q96JY6 352 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 PNKPQ96T60 521 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 C7orf25Q9BPX7 421 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 ADARB2Q9NS39 739 aaKnown RBP5.3□□□□□ -1.56
CLK4-213ENST00000523013 INTUQ9ULD6 942 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
CLK4-213ENST00000523013 POLR2AP24928 1970 aaKnown RBP5.29□□□□□ -1.56
CLK4-213ENST00000523013 KIAA0391O15091 583 aaKnown RBP5.29□□□□□ -1.56
CLK4-213ENST00000523013 FCER1AP12319 257 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 ELLP55199 621 aaPredicted RBP5.29□□□□□ -1.56
CLK4-213ENST00000523013 CTXN1P60606 82 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 TARDBPQ13148 414 aaKnown RBP eCLIP5.29□□□□□ -1.56
CLK4-213ENST00000523013 RHOT1Q8IXI2 618 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 CBARPQ8N350 705 aaPredicted RBP5.29□□□□□ -1.56
CLK4-213ENST00000523013 LNX2Q8N448 690 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 TBC1D15Q8TC07 691 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 MED15Q96RN5 788 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 DUSP26Q9BV47 211 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
CLK4-213ENST00000523013 KCTD5Q9NXV2 234 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
CLK4-213ENST00000523013 ERN1O75460 977 aaKnown RBP5.28□□□□□ -1.56
CLK4-213ENST00000523013 C1QL1O75973 258 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 CLSTN1O94985 981 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 MRPS35P82673 323 aaKnown RBP5.28□□□□□ -1.56
CLK4-213ENST00000523013 HNRNPA0Q13151 305 aaKnown RBP5.28□□□□□ -1.56
CLK4-213ENST00000523013 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 CNTD1Q8N815 330 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 SSH3Q8TE77 659 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 SSH1Q8WYL5 1049 aa5.28□□□□□ -1.56
CLK4-213ENST00000523013 VSX1Q9NZR4 365 aaPredicted RBP5.28□□□□□ -1.56
CLK4-213ENST00000523013 HAUS5O94927 633 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms