RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ZNF746Q6NUN9 644 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-211ENST00000522802 CDH24Q86UP0 819 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 SPPL3Q8TCT6 385 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 SYTL5Q8TDW5 730 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-211ENST00000522802 ATP8B4Q8TF62 1192 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 APBB2Q92870 758 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 P2RX5Q93086 422 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 PPP2R3CQ969Q6 453 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 SPATA33Q96N06 139 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 SEC62Q99442 399 aaKnown RBP7.36□□□□□ -1.23
VPS13B-211ENST00000522802 MAPK8IP1Q9UQF2 711 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 U3KQE9 123 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 FNDC1Q4ZHG4 1894 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-211ENST00000522802 ATRXP46100 2492 aa7.36□□□□□ -1.23
VPS13B-211ENST00000522802 FRYQ5TBA9 3013 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 GPR179Q6PRD1 2367 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 B4DLN1 442 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 RNF113AO15541 343 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SMARCA5O60264 1052 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 CAND2O75155 1236 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 MED26O95402 600 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 GGPS1O95749 300 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 CHRNA1P02708 482 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 LGALS2P05162 132 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 ASGR2P07307 311 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 GNAT2P19087 354 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 UBA1P22314 1058 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 MRPL12P52815 198 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 OXCT1P55809 520 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 ARID5AQ03989 594 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 LPIN1Q14693 890 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 STXBP2Q15833 593 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 NAALADL2Q58DX5 795 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 FBXW10Q5XX13 1052 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 CCDC81Q6ZN84 652 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 RUFY4Q6ZNE9 571 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 PHACTR4Q8IZ21 702 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 IL31RAQ8NI17 732 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 BAHD1Q8TBE0 780 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 PANK1Q8TE04 598 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 NSUN6Q8TEA1 469 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 LMBR1Q8WVP7 490 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SHDQ96IW2 340 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 RMDN3Q96TC7 470 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 KIF2CQ99661 725 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 TMEM47Q9BQJ4 181 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SRRTQ9BXP5 876 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 NAPBQ9H115 298 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 S1PR5Q9H228 398 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 BCAS3Q9H6U6 928 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 TLE6Q9H808 572 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 LRRC4CQ9HCJ2 640 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 PXMP2Q9NR77 195 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SETD4Q9NVD3 440 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 STRIP2Q9ULQ0 834 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SORCS3Q9UPU3 1222 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 FANCMQ8IYD8 2048 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 SPEGQ15772 3267 aa7.35□□□□□ -1.23
VPS13B-211ENST00000522802 CCDC171Q6TFL3 1326 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 C2CD4DB7Z1M9 353 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 PI15O43692 258 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 RANBP6O60518 1105 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 PPFIA4O75335 1185 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 UBOX5O94941 541 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 SLC3A2P08195 630 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 GOLGA8HP0CJ92 632 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 CCNFP41002 786 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 ETV3P41162 512 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 CD97P48960 835 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 SP2Q02086 613 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 ZNF543Q08ER8 600 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 MGAT3Q09327 533 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 ANGPT1Q15389 498 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 CDC37Q16543 378 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 DUSP6Q16828 381 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 CELF3Q5SZQ8 465 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 ARHGEF16Q5VV41 709 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 SYCE2Q6PIF2 218 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 C22orf34Q6ZV56 151 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 LSRQ86X29 649 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 UBALD2Q8IYN6 164 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 CMTR2Q8IYT2 770 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 NEK1Q96PY6 1258 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 IWS1Q96ST2 819 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 TM9SF2Q99805 663 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 NACAP1Q9BZK3 213 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 RNPEPQ9H4A4 650 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 POMKQ9H5K3 350 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 RALYQ9UKM9 306 aaKnown RBP7.34□□□□□ -1.23
VPS13B-211ENST00000522802 TELO2Q9Y4R8 837 aa7.34□□□□□ -1.23
VPS13B-211ENST00000522802 LAMA4Q16363 1823 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms