RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 KCNE1P15382 129 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 PROZP22891 400 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 LIG4P49917 911 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 CLCN5P51795 746 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 SLC10A6Q3KNW5 377 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 HAUS6Q7Z4H7 955 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 ITFG1Q8TB96 612 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 ING5Q8WYH8 240 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 AK8Q96MA6 479 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 REEP2Q9BRK0 252 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 RPP25Q9BUL9 199 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 LARSQ9P2J5 1176 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 MTRRQ9UBK8 725 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 DUSP12Q9UNI6 340 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 CLIC4Q9Y696 253 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 NUMBLQ9Y6R0 609 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 CACNA1HO95180 2353 aa11.18□□□□□ -0.62
CTNNA1-235ENST00000522730 TMEM189-UBE2V1I3L0A0 370 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 K7ENM7 598 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 ABLIM1O14639 778 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 MEFVO15553 781 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 CXCL8P10145 99 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 NPR3P17342 541 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 PLCG1P19174 1290 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 RPL9P32969 192 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 MCM4P33991 863 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 TNFSF9P41273 254 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 PARM1Q6UWI2 310 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 GPR152Q8TDT2 470 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 FGF13Q92913 245 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 MCRS1Q96EZ8 462 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 KIF12Q96FN5 646 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 RHOBTB2Q9BYZ6 727 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 HAPLN2Q9GZV7 340 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 IRF2BPLQ9H1B7 796 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 DNMT3BQ9UBC3 853 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 CDH7Q9ULB5 785 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 MRPS23Q9Y3D9 190 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 BACE2Q9Y5Z0 518 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
CTNNA1-235ENST00000522730 KRBA1A5PL33 1030 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 LACTBL1A8MY62 500 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 H0YCG3 227 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 H7C4K7 107 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 HNRNPDLO14979 420 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 TRAK2O60296 914 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 BMP15O95972 392 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 LRG1P02750 347 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 CLTAP09496 248 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 SRFP11831 508 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 NMT1P30419 496 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 LONP1P36776 959 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 GPC5P78333 572 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 ROR1Q01973 937 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 MCL1Q07820 350 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 HTR4Q13639 388 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 UVSSAQ2YD98 709 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 PABPC1LQ4VXU2 614 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 ZBTB41Q5SVQ8 909 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 ZPBP2Q6X784 338 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 ZNF461Q8TAF7 563 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 LRRC15Q8TF66 581 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 RAD54LQ92698 747 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 FGF14Q92915 247 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 NXPE3Q969Y0 559 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 KXD1Q9BQD3 176 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 MSTO1Q9BUK6 570 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 PARVGQ9HBI0 331 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 BLOC1S4Q9NUP1 217 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 WNT16Q9UBV4 365 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 TBX20Q9UMR3 447 aa11.16□□□□□ -0.62
CTNNA1-235ENST00000522730 DOCK6Q96HP0 2047 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 ANHXE9PGG2 379 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 SEC24AO95486 1093 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 PTPN2P17706 415 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 PDCP20941 246 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 DDIT3P35638 169 aa11.15□□□□□ -0.62
CTNNA1-235ENST00000522730 CDR1P51861 262 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms