RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 NACC1Q96RE7 527 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 POLR3CQ9BUI4 534 aaPredicted RBP13.54□□□□□ -0.24
BRF2-204ENST00000522539 TMEM60Q9H2L4 133 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
BRF2-204ENST00000522539 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
BRF2-204ENST00000522539 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 ATF2P15336 505 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 CCR2P41597 374 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 BRCC3P46736 316 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 NRLP54845 237 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
BRF2-204ENST00000522539 MRPL58Q14197 206 aaKnown RBP13.53□□□□□ -0.24
BRF2-204ENST00000522539 FAM78AQ5JUQ0 283 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 CELF5Q8N6W0 485 aaKnown RBP13.53□□□□□ -0.24
BRF2-204ENST00000522539 ASB16Q96NS5 453 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
BRF2-204ENST00000522539 DCDC2BA2VCK2 349 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 I3L4J1 428 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 SYN3O14994 580 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 LRP3O75074 770 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 MOSPD3O75425 235 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 LRG1P02750 347 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 ADRB1P08588 477 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 RPA1P27694 616 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 EFNA5P52803 228 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 EPHA5P54756 1037 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 MLLT6P55198 1093 aaPredicted RBP13.52□□□□□ -0.25
BRF2-204ENST00000522539 PPP2R5AQ15172 486 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 LAIR1Q6GTX8 287 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 IRF7Q92985 503 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 TCEAL4Q96EI5 215 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
BRF2-204ENST00000522539 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
BRF2-204ENST00000522539 PTPRHQ9HD43 1115 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 TNFSF13BQ9Y275 285 aa13.52□□□□□ -0.25
BRF2-204ENST00000522539 TRIP11Q15643 1979 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 ARNTLO00327 626 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 ZNF197O14709 1029 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 SLC30A4O14863 429 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 SEC24AO95486 1093 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 RETP07949 1114 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 PSMC3P17980 439 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 MUTP22033 750 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 GRM5P41594 1212 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 CCR3P51677 355 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 GRM2Q14416 872 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 TPGS2Q68CL5 300 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 VITQ6UXI7 678 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
BRF2-204ENST00000522539 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 NETO1Q8TDF5 533 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 SMARCD2Q92925 531 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 ZSWIM3Q96MP5 696 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 KIFC3Q9BVG8 833 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 MAFFQ9ULX9 164 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
BRF2-204ENST00000522539 INSL5Q9Y5Q6 135 aa13.51□□□□□ -0.25
BRF2-204ENST00000522539 MAP1BP46821 2468 aaKnown RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 NCANO14594 1321 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 PRRG1O14668 218 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 PAPSS2O95340 614 aaPredicted RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 CHRNB1P11230 501 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 KCNE1P15382 129 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 ELF1P32519 619 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 GAS6Q14393 721 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 PPP2R5DQ14738 602 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 CEP120Q8N960 986 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 LEMD2Q8NC56 503 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 FAM3CQ92520 227 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
BRF2-204ENST00000522539 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 CDT1Q9H211 546 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
BRF2-204ENST00000522539 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
BRF2-204ENST00000522539 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
BRF2-204ENST00000522539 H7C4K7 107 aa13.49□□□□□ -0.25
BRF2-204ENST00000522539 PODXLO00592 558 aa13.49□□□□□ -0.25
BRF2-204ENST00000522539 ABLIM1O14639 778 aa13.49□□□□□ -0.25
BRF2-204ENST00000522539 MEFVO15553 781 aaPredicted RBP13.49□□□□□ -0.25
BRF2-204ENST00000522539 LIG1P18858 919 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms