RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 GLP2RO95838 553 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 MCF2P10911 925 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ZNF18P17022 549 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 KCNA5P22460 613 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 NMT1P30419 496 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 PPP1R2P41236 205 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 GRM5P41594 1212 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 OR1G1P47890 313 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 NRIP1P48552 1158 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 KCNQ1P51787 676 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 OSTNP61366 133 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 MRPS5P82675 430 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 CBX1P83916 185 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 KRT17Q04695 432 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 TBX2Q13207 712 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 TJAP1Q5JTD0 557 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 GLRA4Q5JXX5 417 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 SPATA1Q5VX52 437 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ASTLQ6HA08 431 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ZPBP2Q6X784 338 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 SYT10Q6XYQ8 523 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 HAUS6Q7Z4H7 955 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 CNGA4Q8IV77 575 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 FAM178BQ8IXR5 827 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ATXN2LQ8WWM7 1075 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 KCNN1Q92952 543 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 PPP2R3CQ969Q6 453 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 DNAJC19Q96DA6 116 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 PABPC5Q96DU9 382 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 BICD1Q96G01 975 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ZBTB45Q96K62 511 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 SNX27Q96L92 541 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 FAM193BQ96PV7 902 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ASB2Q96Q27 587 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 ZBP1Q9H171 429 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 TRMT1Q9NXH9 659 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 PUF60Q9UHX1 559 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 MAN1B1Q9UKM7 699 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 CUL9Q8IWT3 2517 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 FRMD3A2A2Y4 597 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CASTOR2A6NHX0 329 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TISP43B9A030 160 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 H3BQ06 376 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 NRP1O14786 923 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 POLR2DO15514 142 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MEFVO15553 781 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 ACTN4O43707 911 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TOM1L1O75674 476 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PPP1R37O75864 691 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PIGRP01833 764 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CCDC175P0C221 793 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 IDEP14735 1019 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 H2AFXP16104 143 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 GAP43P17677 238 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CASQ1P31415 396 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 LIG4P49917 911 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CASP5P51878 434 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MCL1Q07820 350 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TUSC3Q13454 348 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 SMC1AQ14683 1233 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 NAB2Q15742 525 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CLUL1Q15846 466 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 DUSP6Q16828 381 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 AAK1Q2M2I8 961 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CTC1Q2NKJ3 1217 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 SEZ6Q53EL9 994 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 ZC2HC1CQ53FD0 456 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TEX35Q5T0J7 233 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PDE12Q6L8Q7 609 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 SLC39A4Q6P5W5 647 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TMCO3Q6UWJ1 677 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TMC7Q7Z402 723 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 DDX53Q86TM3 631 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 RBM23Q86U06 439 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MAP4K3Q8IVH8 894 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 VPS52Q8N1B4 723 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 GPR161Q8N6U8 529 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 EFHBQ8N7U6 833 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 IQUBQ8NA54 791 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MICAL1Q8TDZ2 1067 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 AUTS2Q8WXX7 1259 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 RABGGTAQ92696 567 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 STAMQ92783 540 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 IQCDQ96DY2 449 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 KIF12Q96FN5 646 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TCHPQ9BT92 498 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 HERC2P3Q9BVR0 1158 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 FGFBP2Q9BYJ0 223 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 HAPLN2Q9GZV7 340 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 HSD3B7Q9H2F3 369 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms