RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RSBN1LQ6PCB5 846 aaPredicted RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 HHIPL2Q6UWX4 724 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 RCOR2Q8IZ40 523 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 RYBPQ8N488 228 aaPredicted RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 FAM161BQ96MY7 647 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 SMYD3Q9H7B4 428 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 SMG5Q9UPR3 1016 aaKnown RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 USP15Q9Y4E8 981 aaPredicted RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 GNGT2O14610 69 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 STRIP1Q5VSL9 837 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 EPHB1P54762 984 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 SLC10A5Q5PT55 438 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 TMCO4Q5TGY1 634 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 TRPM8Q7Z2W7 1104 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 ZNF571Q7Z3V5 609 aaPredicted RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 CENPKQ9BS16 269 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 BFARQ9NZS9 450 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 GGT7Q9UJ14 662 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 ATP8B3O60423 1300 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 PPFIA2O75334 1257 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 PMLP29590 882 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 RAD23BP54727 409 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 CPA5Q8WXQ8 436 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 SGSM3Q96HU1 749 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 CD248Q9HCU0 757 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 BLOC1S4Q9NUP1 217 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 CNTNAP4Q9C0A0 1308 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 SLC4A1P02730 911 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 HSPA8P11142 646 aaKnown RBP14.58□□□□□ -0.07
SYNPO-205ENST00000522122 TAC1P20366 129 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 SSTR3P32745 418 aaPredicted RBP14.58□□□□□ -0.07
SYNPO-205ENST00000522122 EFNA5P52803 228 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 DEUP1Q05D60 604 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 SLC12A1Q13621 1099 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 CATSPER3Q86XQ3 398 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 KDM4CQ9H3R0 1056 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 RIOX1Q9H6W3 641 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 STAP1Q9ULZ2 295 aa14.58□□□□□ -0.07
SYNPO-205ENST00000522122 HUS1O60921 280 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PDHA1P08559 390 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 NFX1Q12986 1120 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 ACAD11Q709F0 780 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 APTXQ7Z2E3 356 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 YTHDF3Q7Z739 585 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 RNF168Q8IYW5 571 aaPredicted RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 ZNF668Q96K58 619 aaPredicted RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 UBXN6Q9BZV1 441 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 JPH1Q9HDC5 661 aaPredicted RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PCDHGC5Q9Y5F6 944 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 KRT10P13645 584 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PAMP19021 973 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 XKR3Q5GH77 459 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 MOXD1Q6UVY6 613 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 IRF2BP1Q8IU81 584 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 CDKL3Q8IVW4 592 aaPredicted RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 BEST2Q8NFU1 509 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 SCFD1Q8WVM8 642 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 BTBD6Q96KE9 485 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 CCDC138Q96M89 665 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 FAM167BQ9BTA0 163 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 FNDC3AQ9Y2H6 1198 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 CCDC22O60826 627 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 SCTRP47872 440 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 KCNJ1P48048 391 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 EIF3EP60228 445 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 IL1RL1Q01638 556 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 P3H1Q32P28 736 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 ANKMY2Q8IV38 441 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 TRIML2Q8N7C3 387 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 C18orf8Q96DM3 657 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PURBQ96QR8 312 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 TTC1Q99614 292 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PABPC3Q9H361 631 aaKnown RBP14.58□□□□□ -0.08
SYNPO-205ENST00000522122 PCDHB2Q9Y5E7 798 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 RGPD2P0DJD1 1756 aa14.58□□□□□ -0.08
SYNPO-205ENST00000522122 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 TYW5A2RUC4 315 aaKnown RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 P4HA2O15460 535 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ASAP2O43150 1006 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 SHOX2O60902 331 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ENTPD3O75355 529 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ACOT2P49753 483 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 ZNF772Q68DY9 489 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 GCOM2Q9BZD3 368 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 FOXP3Q9BZS1 431 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 TMEM117Q9H0C3 514 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 DHX35Q9H5Z1 703 aaKnown RBP14.57□□□□□ -0.08
SYNPO-205ENST00000522122 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 DIAPH2O60879 1101 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 CHEK2O96017 543 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 GHRP10912 638 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 KYNUQ16719 465 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 GJB7Q6PEY0 223 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 RIT2Q99578 217 aa14.57□□□□□ -0.08
SYNPO-205ENST00000522122 POLR3CQ9BUI4 534 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms