RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PDRG1Q9NUG6 133 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 HCFC1R1Q9NWW0 138 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 IGSF9Q9P2J2 1179 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 KANSL3Q9P2N6 904 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 STK36Q9NRP7 1315 aa12.29□□□□□ -0.44
CSMD1-210ENST00000521646 MEFVO15553 781 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-210ENST00000521646 GAS2O43903 313 aaKnown RBP12.28□□□□□ -0.44
CSMD1-210ENST00000521646 JAK2O60674 1132 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 MED24O75448 989 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 ERLIN2O94905 339 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
CSMD1-210ENST00000521646 GPC5P78333 572 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 BMS1Q14692 1282 aaKnown RBP12.28□□□□□ -0.44
CSMD1-210ENST00000521646 GRASPQ7Z6J2 395 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-210ENST00000521646 CCDC116Q8IYX3 515 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 ADAM32Q8TC27 787 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 PDZD7Q9H5P4 517 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 FBXW11Q9UKB1 542 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 SPTBN2O15020 2390 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 COL4A2P08572 1712 aa12.28□□□□□ -0.44
CSMD1-210ENST00000521646 BTBD18B2RXH4 712 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 ASAP2O43150 1006 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 REC8O95072 547 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 SP9P0CG40 484 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 AXLP30530 894 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 POU5F1BQ06416 359 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 ECM1Q16610 540 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 ME3Q16798 604 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 C3orf58Q8NDZ4 430 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 TCP11Q8WWU5 503 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 RTP3Q9BQQ7 232 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 KIFC3Q9BVG8 833 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 NFKBIZQ9BYH8 718 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 CCDC113Q9H0I3 377 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 ARHGEF3Q9NR81 526 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 FNIP2Q9P278 1114 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 CDV3Q9UKY7 258 aaKnown RBP12.27□□□□□ -0.45
CSMD1-210ENST00000521646 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
CSMD1-210ENST00000521646 CCL16O15467 120 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 WFS1O76024 890 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 CD72P21854 359 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 ID4P47928 161 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 GRIK3Q13003 919 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-210ENST00000521646 MXD4Q14582 209 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-210ENST00000521646 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 C6orf118Q5T5N4 469 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 SLC27A1Q6PCB7 646 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-210ENST00000521646 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 CNNM3Q8NE01 707 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
CSMD1-210ENST00000521646 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 FZD8Q9H461 694 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-210ENST00000521646 GOLGA2P5Q9HBQ8 144 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 SLC2A4RGQ9NR83 387 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 ANKEF1Q9NU02 776 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 ZDHHC7Q9NXF8 308 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 SNTG2Q9NY99 539 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 PARP2Q9UGN5 583 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 NCANO14594 1321 aa12.26□□□□□ -0.45
CSMD1-210ENST00000521646 MIA3Q5JRA6 1907 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 CARNS1A5YM72 827 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 I3L4J1 428 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 RECQL4O94761 1208 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 TXKP42681 527 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
CSMD1-210ENST00000521646 FZD5Q13467 585 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 SNW1Q13573 536 aaKnown RBP12.25□□□□□ -0.45
CSMD1-210ENST00000521646 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 OTUD6AQ7L8S5 288 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 CATSPER3Q86XQ3 398 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 KIAA2013Q8IYS2 634 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 PJA1Q8NG27 643 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 HDAC7Q8WUI4 952 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 PIK3R5Q8WYR1 880 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 FGF13Q92913 245 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 KXD1Q9BQD3 176 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 OCSTAMPQ9BR26 566 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 DDX23Q9BUQ8 820 aaKnown RBP12.25□□□□□ -0.45
CSMD1-210ENST00000521646 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 PLEKHA4Q9H4M7 779 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 UBN1Q9NPG3 1134 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 DNMT3BQ9UBC3 853 aaKnown RBP12.25□□□□□ -0.45
CSMD1-210ENST00000521646 EPG5Q9HCE0 2579 aa12.25□□□□□ -0.45
CSMD1-210ENST00000521646 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
CSMD1-210ENST00000521646 LRRIQ4A6NIV6 560 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms