RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CYP11A1P05108 521 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 HOXA9P31269 272 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 CLCN4P51793 760 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 ITIH3Q06033 890 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 SOX4Q06945 474 aaPredicted RBP10.28□□□□□ -0.76
CLK4-209ENST00000521621 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 LILRA6Q6PI73 481 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 ADGRD2Q7Z7M1 963 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 BEST2Q8NFU1 509 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 POMGNT1Q8WZA1 660 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 MFSD14AQ96MC6 490 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 TTPALQ9BTX7 342 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 FGFBP2Q9BYJ0 223 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 S1PR5Q9H228 398 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 MTRRQ9UBK8 725 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 USP20Q9Y2K6 914 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 VWA8A3KMH1 1905 aa10.28□□□□□ -0.76
CLK4-209ENST00000521621 TRIP11Q15643 1979 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 PODXLO00592 558 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 ADH1AP07327 375 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 CXCL8P10145 99 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 PNPLA4P41247 253 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 UBE2HP62256 183 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.76
CLK4-209ENST00000521621 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 LIMS2Q7Z4I7 341 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 SMRP1Q8NCR6 262 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 KIAA0895Q8NCT3 520 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 CACTINQ8WUQ7 758 aaKnown RBP10.27□□□□□ -0.76
CLK4-209ENST00000521621 CXCL16Q9H2A7 254 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 PLEKHA4Q9H4M7 779 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 CD207Q9UJ71 328 aa10.27□□□□□ -0.76
CLK4-209ENST00000521621 GOLGA6L4A6NEF3 574 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 H7C4K7 107 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 OAZ2O95190 189 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 SMC2O95347 1197 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 TNFSF9P41273 254 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 CLCNKBP51801 687 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 KCNA1Q09470 495 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 RAB33AQ14088 237 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 PSMD6Q15008 389 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 HS2ST1Q7LGA3 356 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 SYCP3Q8IZU3 236 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 VN1R2Q8NFZ6 395 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.27□□□□□ -0.77
CLK4-209ENST00000521621 CXorf38Q8TB03 319 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 LNX1Q8TBB1 728 aaPredicted RBP10.27□□□□□ -0.77
CLK4-209ENST00000521621 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 GPR62Q9BZJ7 368 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 ITGA11Q9UKX5 1188 aa10.27□□□□□ -0.77
CLK4-209ENST00000521621 HIDE1A8MVS5 230 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 TBX10O75333 385 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 PRPF6O94906 941 aaKnown RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 AFMP43652 599 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 NRIP1P48552 1158 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 UVSSAQ2YD98 709 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 EDRF1Q3B7T1 1238 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 PLPP4Q5VZY2 271 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 C15orf39Q6ZRI6 1047 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 WDR49Q8IV35 697 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 DSEQ9UL01 958 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZNF233A6NK53 670 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 NT5C1B-RDH14C9J2C7 533 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 PBX3P40426 434 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZCWPW2Q504Y3 356 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 C9orf57Q5W0N0 161 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 JADE1Q6IE81 842 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 ARMCX5Q6P1M9 558 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 XXYLT1Q8NBI6 393 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 APPL2Q8NEU8 664 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 STAMQ92783 540 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 FAXDC2Q96IV6 333 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 IPO9Q96P70 1041 aaKnown RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 BLZF1Q9H2G9 400 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 SFXN1Q9H9B4 322 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 AVENQ9NQS1 362 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 RBAK-RBAKDNI3L0D1 243 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 MBTPS2O43462 519 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 CALUO43852 315 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 HNRNPA1P09651 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLK4-209ENST00000521621 MATR3P43243 847 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLK4-209ENST00000521621 SMARCB1Q12824 385 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 STK4Q13043 487 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 CBX2Q14781 532 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZNF658Q5TYW1 1059 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 TRIML1Q8N9V2 468 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms