RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TCEAL4Q96EI5 215 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 TCEANC2Q96MN5 208 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 ASB16Q96NS5 453 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 HHIPQ96QV1 700 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 CLSTN3Q9BQT9 956 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 ZFP14Q9HCL3 533 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 TPCN1Q9ULQ1 816 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 SMC3Q9UQE7 1217 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 SETD2Q9BYW2 2564 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 THADAQ6YHU6 1953 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 IGKV6D-21A0A0A0MT36 114 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 SPECC1L-ADORA2AF8WAN1 911 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 SMAPO00193 183 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 HBP1O60381 514 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 ZNF623O75123 536 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 ATG7O95352 703 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 POMCP01189 267 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 RHOP08100 348 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 C6P13671 934 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 DARSP14868 501 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 CTHP32929 405 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 CCR2P41597 374 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 CLCN3P51790 818 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 TOB2Q14106 344 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 PRSS55Q6UWB4 352 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 CYP2U1Q7Z449 544 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 NLRX1Q86UT6 975 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 CAMKK1Q8N5S9 505 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 TTC8Q8TAM2 541 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 GPT2Q8TD30 523 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 GPRASP2Q96D09 838 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 AVENQ9NQS1 362 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 DACT1Q9NYF0 836 aa8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 MUC22E2RYF6 1773 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 KIF26AQ9ULI4 1882 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-227ENST00000521387 ERVH48-1M5A8F1 160 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 ZNF263O14978 683 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 ZBTB5O15062 677 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 DHX16O60231 1041 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 XYLBO75191 536 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 MOSPD3O75425 235 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 CYP21A2P08686 494 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 SYT1P21579 422 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 GJB2P29033 226 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 GBP1P32455 592 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 ACTR2P61160 394 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 LY6DQ14210 128 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC23A3Q6PIS1 610 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC7A14Q8TBB6 771 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 WBP1Q96G27 269 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 ZKSCAN3Q9BRR0 538 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 C8orf33Q9H7E9 229 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 FAM105AQ9NUU6 356 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 MIOSQ9NXC5 875 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC8A2Q9UPR5 921 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 UBIAD1Q9Y5Z9 338 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 BSNQ9UPA5 3926 aa8.16□□□□□ -1.1
CTNNA1-227ENST00000521387 VWA8A3KMH1 1905 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 ADAMTS9Q9P2N4 1935 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 PDCD11Q14690 1871 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 TSC2P49815 1807 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 COL1A2P08123 1366 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 WDR27A2RRH5 827 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 STX6O43752 255 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 CBFA2T3O75081 653 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 GJB3O75712 270 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 DKK1O94907 266 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 OR1G1P47890 313 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 GPC3P51654 580 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 DSC1Q08554 894 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 HNRNPDQ14103 355 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 KRT32Q14532 448 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 GRM4Q14833 912 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 ASPRV1Q53RT3 343 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 TAF1BQ53T94 588 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 ZNF484Q5JVG2 852 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 AXDND1Q5T1B0 1012 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 LIN9Q5TKA1 542 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 HIST2H2BCQ6DN03 193 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 FSTL4Q6MZW2 842 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 CAVIN1Q6NZI2 390 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 Q6ZUG5 572 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms