RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 UVSSAQ2YD98 709 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 SLC10A6Q3KNW5 377 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 VARS2Q5ST30 1063 aaKnown RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 RSPO2Q6UXX9 243 aaPredicted RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 SIX5Q8N196 739 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 TMEM105Q8N8V8 129 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
CLN8-205ENST00000520991 ZFP37Q9Y6Q3 630 aaPredicted RBP17.27■□□□□ 0.36
CLN8-205ENST00000520991 H7C4K7 107 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 SYN3O14994 580 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 MEFVO15553 781 aaPredicted RBP17.26■□□□□ 0.35
CLN8-205ENST00000520991 CFHP08603 1231 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 CLTAP09496 248 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 SCP2P22307 547 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 MCM4P33991 863 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 CLCN5P51795 746 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 RTL10Q7L3V2 364 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 SLC44A3Q8N4M1 653 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
CLN8-205ENST00000520991 PLEKHA5Q9HAU0 1116 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 TBX20Q9UMR3 447 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
CLN8-205ENST00000520991 GALR2O43603 387 aaPredicted RBP17.25■□□□□ 0.35
CLN8-205ENST00000520991 TRAK2O60296 914 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 POU2F2P09086 479 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 SRFP11831 508 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 RFX1P22670 979 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 ZNF131P52739 623 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 ARPP19P56211 112 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 ROR1Q01973 937 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 KYAT1Q16773 422 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 SLC8B1Q6J4K2 584 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 ATOH1Q92858 354 aaPredicted RBP17.25■□□□□ 0.35
CLN8-205ENST00000520991 KIF12Q96FN5 646 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 HAPLN2Q9GZV7 340 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 FAM86C1Q9NVL1 165 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 CDH7Q9ULB5 785 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 DOCK8Q8NF50 2099 aa17.25■□□□□ 0.35
CLN8-205ENST00000520991 STK25O00506 426 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 PRRG1O14668 218 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 ELF1P32519 619 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 ABCD1P33897 745 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 SPAG1Q07617 926 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 HTR4Q13639 388 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 PABPC1LQ4VXU2 614 aaKnown RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 SPECC1Q5M775 1068 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 CWF19L1Q69YN2 538 aaKnown RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 ST13P5Q8NFI4 369 aaPredicted RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 KCNN1Q92952 543 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 EPSTI1Q96J88 318 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 PHOX2BQ99453 314 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 CCSER1Q9C0I3 900 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 HCFC1R1Q9NWW0 138 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 WNT16Q9UBV4 365 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 NUMBLQ9Y6R0 609 aa17.24■□□□□ 0.35
CLN8-205ENST00000520991 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
CLN8-205ENST00000520991 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 ANHXE9PGG2 379 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 H0Y858 1186 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 OGTO15294 1046 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 XPOTO43592 962 aaKnown RBP17.23■□□□□ 0.35
CLN8-205ENST00000520991 LRG1P02750 347 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 SYT1P21579 422 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 DDIT3P35638 169 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 TXLNAP40222 546 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 TNFSF9P41273 254 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 RESTQ13127 1097 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 ZNF280DQ6N043 979 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 ITFG1Q8TB96 612 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 FGF13Q92913 245 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 RPF1Q9H9Y2 349 aaKnown RBP17.23■□□□□ 0.35
CLN8-205ENST00000520991 DNMT3BQ9UBC3 853 aaKnown RBP17.23■□□□□ 0.35
CLN8-205ENST00000520991 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 CA14Q9ULX7 337 aa17.23■□□□□ 0.35
CLN8-205ENST00000520991 UBQLN1Q9UMX0 589 aaKnown RBP17.23■□□□□ 0.35
CLN8-205ENST00000520991 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 LACTBL1A8MY62 500 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 PIGRP01833 764 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 NPR3P17342 541 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 AOC1P19801 751 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
CLN8-205ENST00000520991 PTPAQ15257 358 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 DDX12PQ92771 950 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 RTP3Q9BQQ7 232 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 MSTO1Q9BUK6 570 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 CYP4F11Q9HBI6 524 aa17.22■□□□□ 0.35
CLN8-205ENST00000520991 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms